Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC31.97■■■□□ 2.71
CFTRP13569 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC31.97■■■□□ 2.71
CFTRP13569 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC31.97■■■□□ 2.71
CFTRP13569 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CFTRP13569 URGCP-206ENST00000446958 365 ntTSL 2 BASIC31.97■■■□□ 2.71
CFTRP13569 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CFTRP13569 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC31.97■■■□□ 2.71
CFTRP13569 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC31.97■■■□□ 2.71
CFTRP13569 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
CFTRP13569 AC104109.2-201ENST00000602919 1418 ntBASIC31.97■■■□□ 2.71
CFTRP13569 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC31.96■■■□□ 2.71
CFTRP13569 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC31.96■■■□□ 2.71
CFTRP13569 MIR940-201ENST00000401276 94 ntBASIC31.96■■■□□ 2.71
CFTRP13569 IMP4-203ENST00000409935 958 ntTSL 5 BASIC31.96■■■□□ 2.71
CFTRP13569 AC010327.4-202ENST00000591484 748 ntBASIC31.96■■■□□ 2.71
CFTRP13569 AC027601.4-201ENST00000611259 610 ntBASIC31.96■■■□□ 2.71
CFTRP13569 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CFTRP13569 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CFTRP13569 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC31.95■■■□□ 2.71
CFTRP13569 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
CFTRP13569 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CFTRP13569 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CFTRP13569 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
CFTRP13569 TP73-AS1-210ENST00000637775 1455 ntBASIC31.95■■■□□ 2.71
CFTRP13569 AC112777.1-201ENST00000540175 1423 ntBASIC31.95■■■□□ 2.71
CFTRP13569 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC31.95■■■□□ 2.71
CFTRP13569 AC022898.2-201ENST00000616822 1312 ntBASIC31.95■■■□□ 2.71
CFTRP13569 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CFTRP13569 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CFTRP13569 AL356488.2-201ENST00000602755 427 ntBASIC31.95■■■□□ 2.7
CFTRP13569 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
CFTRP13569 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
CFTRP13569 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CFTRP13569 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFTRP13569 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFTRP13569 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
CFTRP13569 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC31.94■■■□□ 2.7
CFTRP13569 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFTRP13569 MED15P5-201ENST00000423150 992 ntBASIC31.94■■■□□ 2.7
CFTRP13569 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC31.94■■■□□ 2.7
CFTRP13569 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFTRP13569 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CFTRP13569 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC31.94■■■□□ 2.7
CFTRP13569 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
CFTRP13569 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC31.93■■■□□ 2.7
CFTRP13569 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC31.93■■■□□ 2.7
CFTRP13569 AL591424.1-201ENST00000442569 1213 ntBASIC31.93■■■□□ 2.7
CFTRP13569 MEG3-211ENST00000452514 461 ntTSL 3 BASIC31.93■■■□□ 2.7
CFTRP13569 KRT18P41-201ENST00000518924 1277 ntBASIC31.93■■■□□ 2.7
CFTRP13569 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 AC021087.4-201ENST00000563761 564 ntBASIC31.93■■■□□ 2.7
CFTRP13569 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 Z98044.1-201ENST00000632503 1764 ntBASIC31.93■■■□□ 2.7
CFTRP13569 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC31.93■■■□□ 2.7
CFTRP13569 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CFTRP13569 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
CFTRP13569 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CFTRP13569 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC31.92■■■□□ 2.7
CFTRP13569 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC31.92■■■□□ 2.7
CFTRP13569 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC31.92■■■□□ 2.7
CFTRP13569 MTDHP3-201ENST00000594186 672 ntBASIC31.92■■■□□ 2.7
CFTRP13569 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFTRP13569 FEM1AP3-201ENST00000403722 1741 ntBASIC31.92■■■□□ 2.7
CFTRP13569 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CFTRP13569 INTS4P1-201ENST00000438455 1935 ntBASIC31.92■■■□□ 2.7
CFTRP13569 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
CFTRP13569 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC31.92■■■□□ 2.7
CFTRP13569 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.91■■■□□ 2.7
CFTRP13569 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC31.91■■■□□ 2.7
CFTRP13569 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
CFTRP13569 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC31.91■■■□□ 2.7
CFTRP13569 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC31.91■■■□□ 2.7
CFTRP13569 AC012640.2-201ENST00000561606 901 ntBASIC31.91■■■□□ 2.7
CFTRP13569 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC31.91■■■□□ 2.7
CFTRP13569 AL138831.2-201ENST00000606564 490 ntBASIC31.91■■■□□ 2.7
CFTRP13569 AL139424.1-201ENST00000607572 797 ntBASIC31.91■■■□□ 2.7
CFTRP13569 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC31.91■■■□□ 2.7
CFTRP13569 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CFTRP13569 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms