Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 KRT8P8-201ENST00000434750 1448 ntBASIC19.64■□□□□ 0.73
CD248Q9HCU0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.64■□□□□ 0.73
CD248Q9HCU0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD248Q9HCU0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.63■□□□□ 0.73
CD248Q9HCU0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD248Q9HCU0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.63■□□□□ 0.73
CD248Q9HCU0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 AC128688.1-201ENST00000487626 519 ntBASIC19.62■□□□□ 0.73
CD248Q9HCU0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 AL138966.2-201ENST00000621997 464 ntBASIC19.62■□□□□ 0.73
CD248Q9HCU0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD248Q9HCU0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CD248Q9HCU0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 FAM207BP-201ENST00000447172 505 ntBASIC19.61■□□□□ 0.73
CD248Q9HCU0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 AL023803.3-201ENST00000615559 522 ntBASIC19.61■□□□□ 0.73
CD248Q9HCU0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CD248Q9HCU0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD248Q9HCU0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms