Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 AC120114.3-201ENST00000611923 658 ntBASIC20.06■□□□□ 0.8
YME1L1Q96TA2 AL592071.1-201ENST00000611956 408 ntBASIC20.06■□□□□ 0.8
YME1L1Q96TA2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YME1L1Q96TA2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 VENTXP7-201ENST00000475503 772 ntBASIC20.05■□□□□ 0.8
YME1L1Q96TA2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 GUSBP12-201ENST00000513727 720 ntBASIC20.05■□□□□ 0.8
YME1L1Q96TA2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 AC124864.1-201ENST00000623408 392 ntBASIC20.05■□□□□ 0.8
YME1L1Q96TA2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
YME1L1Q96TA2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 IGHGP-201ENST00000390555 1178 ntBASIC20.04■□□□□ 0.8
YME1L1Q96TA2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.04■□□□□ 0.8
YME1L1Q96TA2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
YME1L1Q96TA2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 HLA-A-201ENST00000376802 1334 ntBASIC20.03■□□□□ 0.8
YME1L1Q96TA2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 AC034236.2-201ENST00000606662 1610 ntBASIC20.03■□□□□ 0.8
YME1L1Q96TA2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 AC073130.3-201ENST00000624389 2278 ntBASIC20.03■□□□□ 0.8
YME1L1Q96TA2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 AP000593.1-201ENST00000393668 712 ntBASIC20.03■□□□□ 0.8
YME1L1Q96TA2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 IGHV3-47-201ENST00000425060 335 ntBASIC20.03■□□□□ 0.8
YME1L1Q96TA2 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 MIR3180-4-201ENST00000582223 153 ntBASIC20.03■□□□□ 0.8
YME1L1Q96TA2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 AC112907.3-201ENST00000577781 2400 ntBASIC20.03■□□□□ 0.8
YME1L1Q96TA2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YME1L1Q96TA2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms