Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 TP73-AS1-207ENST00000624167 988 ntBASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNIP1Q8TAD8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 HCG11-201ENST00000411553 5696 ntBASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 AF238378.1-201ENST00000526806 358 ntBASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 AC104417.2-201ENST00000562989 1793 ntBASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SNIP1Q8TAD8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 RNPS1P1-201ENST00000507437 918 ntBASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 KRT8P7-201ENST00000533003 1432 ntBASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNIP1Q8TAD8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 VENTXP7-201ENST00000475503 772 ntBASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.59■□□□□ 0.41
SNIP1Q8TAD8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms