Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 AC104076.2-201ENST00000448912 469 ntBASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 COX11P1-201ENST00000489116 835 ntBASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 AL049597.2-201ENST00000565575 961 ntBASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 WWOX-216ENST00000569818 525 ntBASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 AC010331.1-201ENST00000611423 582 ntBASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 NEFHP1-201ENST00000412845 2629 ntBASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 AP000523.1-201ENST00000398242 1049 ntBASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 MCCD1P1-208ENST00000445732 328 ntBASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 DUX4L26-201ENST00000489078 1255 ntBASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 CR769767.2-201ENST00000622735 460 ntBASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH20Q8N6Y1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 AC117947.1-201ENST00000427448 529 ntBASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 NEK4P2-201ENST00000580004 1012 ntBASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 AL031432.5-201ENST00000641059 760 ntBASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 AL512353.2-201ENST00000448759 1962 ntBASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 AC020763.4-201ENST00000623414 4170 ntBASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH20Q8N6Y1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDH20Q8N6Y1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDH20Q8N6Y1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms