Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS3Q8IXF0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 AC009078.2-202ENST00000463353 338 ntBASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 AP003733.1-201ENST00000491725 852 ntBASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 FOSL1P1-201ENST00000511041 816 ntBASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 AL031008.1-201ENST00000619963 541 ntBASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS3Q8IXF0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 KRT8P32-201ENST00000512863 1461 ntBASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 AC090616.6-201ENST00000582640 721 ntBASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPAS3Q8IXF0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 KRT18P31-201ENST00000506277 1292 ntBASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 AC104692.2-201ENST00000603054 253 ntBASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPAS3Q8IXF0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NPAS3Q8IXF0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.33■□□□□ 0.69
NPAS3Q8IXF0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 AC079781.3-201ENST00000449110 356 ntBASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 AC104819.1-201ENST00000504587 486 ntBASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPAS3Q8IXF0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms