Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 SNORA78-201ENST00000459373 127 ntBASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 SCARNA1-201ENST00000517138 166 ntBASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AP001094.1-201ENST00000579805 193 ntBASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AF186192.3-201ENST00000583427 947 ntBASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AL353708.3-201ENST00000610272 989 ntBASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC091948.2-201ENST00000636510 279 ntBASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3CPQ6ZMV5 CIR1P2-201ENST00000514821 1342 ntBASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 TPTE2P3-201ENST00000441562 1189 ntBASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 BOLA3P3-201ENST00000505182 232 ntBASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 IGHVIII-5-2-201ENST00000522505 261 ntBASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PPP4R3CPQ6ZMV5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC007342.9-201ENST00000623877 1385 ntBASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC116562.4-201ENST00000641316 2276 ntBASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PPP4R3CPQ6ZMV5 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 KRT18P16-201ENST00000510337 1294 ntBASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC093424.1-201ENST00000604999 338 ntBASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 Z99129.2-201ENST00000619967 314 ntBASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP4R3CPQ6ZMV5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 OR5AQ1P-203ENST00000641818 1529 ntBASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 RNU2-72P-201ENST00000411175 163 ntBASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 Metazoa_SRP.26-201ENST00000547793 284 ntBASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC027176.2-201ENST00000559166 746 ntBASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3CPQ6ZMV5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms