Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.12■□□□□ 0.97
LBX1P52954 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 ABCD1P5-201ENST00000445663 754 ntBASIC21.12■□□□□ 0.97
LBX1P52954 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.12■□□□□ 0.97
LBX1P52954 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.12■□□□□ 0.97
LBX1P52954 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.12■□□□□ 0.97
LBX1P52954 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.12■□□□□ 0.97
LBX1P52954 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.12■□□□□ 0.97
LBX1P52954 MTDHP4-201ENST00000600287 670 ntBASIC21.12■□□□□ 0.97
LBX1P52954 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.12■□□□□ 0.97
LBX1P52954 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LBX1P52954 AC112777.1-201ENST00000540175 1423 ntBASIC21.12■□□□□ 0.97
LBX1P52954 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LBX1P52954 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LBX1P52954 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.11■□□□□ 0.97
LBX1P52954 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LBX1P52954 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
LBX1P52954 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LBX1P52954 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LBX1P52954 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.11■□□□□ 0.97
LBX1P52954 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LBX1P52954 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.11■□□□□ 0.97
LBX1P52954 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.11■□□□□ 0.97
LBX1P52954 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.11■□□□□ 0.97
LBX1P52954 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LBX1P52954 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.11■□□□□ 0.97
LBX1P52954 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LBX1P52954 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.11■□□□□ 0.97
LBX1P52954 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LBX1P52954 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LBX1P52954 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LBX1P52954 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.1■□□□□ 0.97
LBX1P52954 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LBX1P52954 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.1■□□□□ 0.97
LBX1P52954 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LBX1P52954 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.1■□□□□ 0.97
LBX1P52954 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.1■□□□□ 0.97
LBX1P52954 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LBX1P52954 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.1■□□□□ 0.97
LBX1P52954 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LBX1P52954 AC104417.2-201ENST00000562989 1793 ntBASIC21.1■□□□□ 0.97
LBX1P52954 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LBX1P52954 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.1■□□□□ 0.97
LBX1P52954 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LBX1P52954 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.09■□□□□ 0.97
LBX1P52954 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.09■□□□□ 0.97
LBX1P52954 MKNK2P1-201ENST00000437526 628 ntBASIC21.09■□□□□ 0.97
LBX1P52954 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.09■□□□□ 0.97
LBX1P52954 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.09■□□□□ 0.97
LBX1P52954 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.09■□□□□ 0.97
LBX1P52954 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.09■□□□□ 0.97
LBX1P52954 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.09■□□□□ 0.97
LBX1P52954 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LBX1P52954 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.09■□□□□ 0.97
LBX1P52954 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.09■□□□□ 0.97
LBX1P52954 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.09■□□□□ 0.97
LBX1P52954 AL513190.1-201ENST00000621254 727 ntBASIC21.09■□□□□ 0.97
LBX1P52954 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LBX1P52954 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
LBX1P52954 AC008556.1-201ENST00000610908 2040 ntBASIC21.09■□□□□ 0.97
LBX1P52954 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LBX1P52954 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LBX1P52954 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LBX1P52954 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LBX1P52954 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.08■□□□□ 0.97
LBX1P52954 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LBX1P52954 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LBX1P52954 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.08■□□□□ 0.97
LBX1P52954 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LBX1P52954 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LBX1P52954 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.08■□□□□ 0.97
LBX1P52954 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.08■□□□□ 0.97
LBX1P52954 MIR3180-4-201ENST00000582223 153 ntBASIC21.08■□□□□ 0.97
LBX1P52954 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.08■□□□□ 0.97
LBX1P52954 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
LBX1P52954 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.08■□□□□ 0.96
LBX1P52954 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LBX1P52954 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LBX1P52954 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LBX1P52954 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LBX1P52954 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
LBX1P52954 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LBX1P52954 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LBX1P52954 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.07■□□□□ 0.96
LBX1P52954 MRPL20P1-201ENST00000400819 433 ntBASIC21.07■□□□□ 0.96
LBX1P52954 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms