Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.04■■□□□ 1.28
PDE6BP35913 AF186996.4-201ENST00000467186 377 ntBASIC23.04■■□□□ 1.28
PDE6BP35913 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.04■■□□□ 1.28
PDE6BP35913 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.04■■□□□ 1.28
PDE6BP35913 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.04■■□□□ 1.28
PDE6BP35913 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.04■■□□□ 1.28
PDE6BP35913 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.04■■□□□ 1.28
PDE6BP35913 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.03■■□□□ 1.28
PDE6BP35913 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE6BP35913 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
PDE6BP35913 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE6BP35913 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDE6BP35913 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.03■■□□□ 1.28
PDE6BP35913 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDE6BP35913 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.03■■□□□ 1.28
PDE6BP35913 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.03■■□□□ 1.28
PDE6BP35913 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.03■■□□□ 1.28
PDE6BP35913 AL591684.3-201ENST00000605187 298 ntBASIC23.03■■□□□ 1.28
PDE6BP35913 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PDE6BP35913 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE6BP35913 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE6BP35913 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE6BP35913 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE6BP35913 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE6BP35913 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.02■■□□□ 1.28
PDE6BP35913 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE6BP35913 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE6BP35913 AC093909.1-201ENST00000504731 1122 ntBASIC23.02■■□□□ 1.28
PDE6BP35913 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.02■■□□□ 1.28
PDE6BP35913 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.02■■□□□ 1.28
PDE6BP35913 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.02■■□□□ 1.28
PDE6BP35913 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.02■■□□□ 1.28
PDE6BP35913 MIR5100-201ENST00000579544 119 ntBASIC23.02■■□□□ 1.28
PDE6BP35913 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.02■■□□□ 1.28
PDE6BP35913 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE6BP35913 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDE6BP35913 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
PDE6BP35913 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.02■■□□□ 1.28
PDE6BP35913 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.01■■□□□ 1.27
PDE6BP35913 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE6BP35913 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.01■■□□□ 1.27
PDE6BP35913 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.01■■□□□ 1.27
PDE6BP35913 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE6BP35913 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE6BP35913 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PDE6BP35913 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE6BP35913 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE6BP35913 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.01■■□□□ 1.27
PDE6BP35913 RNPS1P1-201ENST00000507437 918 ntBASIC23.01■■□□□ 1.27
PDE6BP35913 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.01■■□□□ 1.27
PDE6BP35913 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PDE6BP35913 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.01■■□□□ 1.27
PDE6BP35913 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.01■■□□□ 1.27
PDE6BP35913 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDE6BP35913 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.01■■□□□ 1.27
PDE6BP35913 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.01■■□□□ 1.27
PDE6BP35913 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE6BP35913 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PDE6BP35913 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PDE6BP35913 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
PDE6BP35913 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PDE6BP35913 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 FEM1AP3-201ENST00000403722 1741 ntBASIC23■■□□□ 1.27
PDE6BP35913 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23■■□□□ 1.27
PDE6BP35913 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23■■□□□ 1.27
PDE6BP35913 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 AC106730.1-201ENST00000566722 1090 ntBASIC23■■□□□ 1.27
PDE6BP35913 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23■■□□□ 1.27
PDE6BP35913 BNIP3P18-201ENST00000593976 575 ntBASIC23■■□□□ 1.27
PDE6BP35913 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23■■□□□ 1.27
PDE6BP35913 AC007375.3-201ENST00000600936 2314 ntBASIC23■■□□□ 1.27
PDE6BP35913 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23■■□□□ 1.27
PDE6BP35913 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23■■□□□ 1.27
PDE6BP35913 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
PDE6BP35913 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDE6BP35913 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.99■■□□□ 1.27
PDE6BP35913 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDE6BP35913 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms