Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA1P25391 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA1P25391 AP001005.1-201ENST00000571755 1248 ntBASIC18.31■□□□□ 0.52
LAMA1P25391 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA1P25391 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.31■□□□□ 0.52
LAMA1P25391 AL355385.1-201ENST00000606123 409 ntBASIC18.31■□□□□ 0.52
LAMA1P25391 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.31■□□□□ 0.52
LAMA1P25391 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LAMA1P25391 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
LAMA1P25391 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 KRT18P23-201ENST00000435622 1283 ntBASIC18.3■□□□□ 0.52
LAMA1P25391 RPL13AP23-201ENST00000480739 586 ntBASIC18.3■□□□□ 0.52
LAMA1P25391 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA1P25391 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.3■□□□□ 0.52
LAMA1P25391 AC010240.3-201ENST00000607688 395 ntBASIC18.3■□□□□ 0.52
LAMA1P25391 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.3■□□□□ 0.52
LAMA1P25391 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA1P25391 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA1P25391 IGHV3-22-201ENST00000520721 359 ntBASIC18.3■□□□□ 0.52
LAMA1P25391 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.3■□□□□ 0.52
LAMA1P25391 BNIP3P18-201ENST00000593976 575 ntBASIC18.3■□□□□ 0.52
LAMA1P25391 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
LAMA1P25391 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA1P25391 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA1P25391 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 MIR940-201ENST00000401276 94 ntBASIC18.29■□□□□ 0.52
LAMA1P25391 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.29■□□□□ 0.52
LAMA1P25391 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.29■□□□□ 0.52
LAMA1P25391 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LAMA1P25391 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.29■□□□□ 0.52
LAMA1P25391 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 TCF3P1-201ENST00000423021 1937 ntBASIC18.29■□□□□ 0.52
LAMA1P25391 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LAMA1P25391 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.29■□□□□ 0.52
LAMA1P25391 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LAMA1P25391 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LAMA1P25391 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LAMA1P25391 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.29■□□□□ 0.52
LAMA1P25391 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.29■□□□□ 0.52
LAMA1P25391 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.29■□□□□ 0.52
LAMA1P25391 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.29■□□□□ 0.52
LAMA1P25391 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.29■□□□□ 0.52
LAMA1P25391 AL592071.1-201ENST00000611956 408 ntBASIC18.29■□□□□ 0.52
LAMA1P25391 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LAMA1P25391 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.28■□□□□ 0.52
LAMA1P25391 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 AC022898.2-201ENST00000616822 1312 ntBASIC18.28■□□□□ 0.52
LAMA1P25391 AC018712.1-201ENST00000455767 687 ntBASIC18.28■□□□□ 0.52
LAMA1P25391 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.28■□□□□ 0.52
LAMA1P25391 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.28■□□□□ 0.52
LAMA1P25391 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LAMA1P25391 AL390719.2-201ENST00000606993 987 ntBASIC18.28■□□□□ 0.52
LAMA1P25391 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LAMA1P25391 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LAMA1P25391 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LAMA1P25391 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.28■□□□□ 0.52
LAMA1P25391 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.28■□□□□ 0.52
LAMA1P25391 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LAMA1P25391 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LAMA1P25391 AL109659.2-201ENST00000606809 1674 ntBASIC18.27■□□□□ 0.52
LAMA1P25391 TEX21P-204ENST00000641479 1693 ntBASIC18.27■□□□□ 0.52
LAMA1P25391 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LAMA1P25391 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.27■□□□□ 0.52
LAMA1P25391 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.27■□□□□ 0.52
LAMA1P25391 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LAMA1P25391 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LAMA1P25391 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LAMA1P25391 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.27■□□□□ 0.52
LAMA1P25391 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.27■□□□□ 0.52
LAMA1P25391 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LAMA1P25391 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.27■□□□□ 0.52
LAMA1P25391 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.27■□□□□ 0.52
LAMA1P25391 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.27■□□□□ 0.52
LAMA1P25391 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms