Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 POM121L3P-201ENST00000419331 1163 ntBASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 BNIP3P18-201ENST00000593976 575 ntBASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.79■■□□□ 1.4
LOC102724428A0A0B4J2F2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 IRX1P1-201ENST00000438849 1838 ntBASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 KRT18P13-201ENST00000400056 1290 ntBASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.78■■□□□ 1.4
LOC102724428A0A0B4J2F2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 AL031284.1-201ENST00000419297 478 ntBASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 KRT18P67-201ENST00000432816 1264 ntBASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC148477.8-201ENST00000624298 468 ntBASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
LOC102724428A0A0B4J2F2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.76■■□□□ 1.39
LOC102724428A0A0B4J2F2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 MIR5100-201ENST00000579544 119 ntBASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 AL591684.3-201ENST00000605187 298 ntBASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 AC068587.9-201ENST00000641814 219 ntBASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LOC102724428A0A0B4J2F2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms