Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 KRT16P6-202ENST00000425692 1426 ntBASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ID1-201ENST00000376105 1233 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AC023632.3-201ENST00000521633 145 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AC104771.1-201ENST00000603335 964 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AL031963.3-201ENST00000606441 850 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AC090164.3-201ENST00000610780 2143 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AL596257.1-201ENST00000641463 2694 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 KRT8P17-201ENST00000453110 1448 ntBASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-6A0A0B4J262 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 AL162727.3-201ENST00000635661 2787 ntBASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 AL355802.2-201ENST00000402069 882 ntBASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 AC091874.3-201ENST00000512672 1195 ntBASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-6A0A0B4J262 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms