Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 IER3-202ENST00000376377 1350 ntBASIC17.2■□□□□ 0.34
LRFN1Q9P244 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 VENTXP5-201ENST00000523979 775 ntBASIC17.2■□□□□ 0.34
LRFN1Q9P244 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 FP475955.4-201ENST00000623131 1990 ntBASIC17.2■□□□□ 0.34
LRFN1Q9P244 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 LINC01311-201ENST00000565162 1445 ntBASIC17.2■□□□□ 0.34
LRFN1Q9P244 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.2■□□□□ 0.34
LRFN1Q9P244 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 AL109659.2-201ENST00000606809 1674 ntBASIC17.2■□□□□ 0.34
LRFN1Q9P244 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRFN1Q9P244 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 ZNF444P1-201ENST00000559497 298 ntBASIC17.19■□□□□ 0.34
LRFN1Q9P244 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.19■□□□□ 0.34
LRFN1Q9P244 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.19■□□□□ 0.34
LRFN1Q9P244 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 AC005332.1-201ENST00000577698 1310 ntBASIC17.19■□□□□ 0.34
LRFN1Q9P244 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRFN1Q9P244 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 AC008556.1-201ENST00000610908 2040 ntBASIC17.18■□□□□ 0.34
LRFN1Q9P244 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 RASA4DP-201ENST00000460726 1199 ntBASIC17.18■□□□□ 0.34
LRFN1Q9P244 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 AL136038.3-201ENST00000561909 1096 ntBASIC17.18■□□□□ 0.34
LRFN1Q9P244 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 AC083849.1-201ENST00000615227 514 ntBASIC17.18■□□□□ 0.34
LRFN1Q9P244 AC112497.1-201ENST00000624824 639 ntBASIC17.18■□□□□ 0.34
LRFN1Q9P244 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.18■□□□□ 0.34
LRFN1Q9P244 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRFN1Q9P244 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms