Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 RASA4DP-201ENST00000460726 1199 ntBASIC18.17■□□□□ 0.5
SLC38A3Q99624 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 AC005332.1-201ENST00000577698 1310 ntBASIC18.17■□□□□ 0.5
SLC38A3Q99624 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 FP475955.4-201ENST00000623131 1990 ntBASIC18.17■□□□□ 0.5
SLC38A3Q99624 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A3Q99624 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SLC38A3Q99624 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 AL109659.2-201ENST00000606809 1674 ntBASIC18.16■□□□□ 0.5
SLC38A3Q99624 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 AC112497.1-201ENST00000624824 639 ntBASIC18.16■□□□□ 0.5
SLC38A3Q99624 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A3Q99624 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC38A3Q99624 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 AL136038.3-201ENST00000561909 1096 ntBASIC18.15■□□□□ 0.5
SLC38A3Q99624 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 AC008556.1-201ENST00000610908 2040 ntBASIC18.15■□□□□ 0.5
SLC38A3Q99624 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A3Q99624 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC38A3Q99624 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
SLC38A3Q99624 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SLC38A3Q99624 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A3Q99624 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A3Q99624 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SLC38A3Q99624 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A3Q99624 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A3Q99624 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A3Q99624 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC38A3Q99624 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A3Q99624 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC38A3Q99624 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC38A3Q99624 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC38A3Q99624 AC083849.1-201ENST00000615227 514 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms