Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
SCAF11Q99590 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCAF11Q99590 GAS2L1P1-201ENST00000420145 1480 ntBASIC26.91■■□□□ 1.9
SCAF11Q99590 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC26.91■■□□□ 1.9
SCAF11Q99590 ME2-218ENST00000640965 2476 ntTSL 5 BASIC26.91■■□□□ 1.9
SCAF11Q99590 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
SCAF11Q99590 Z82202.1-201ENST00000623446 1880 ntBASIC26.9■■□□□ 1.9
SCAF11Q99590 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 FAM220CP-201ENST00000395253 831 ntBASIC26.9■■□□□ 1.9
SCAF11Q99590 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC26.9■■□□□ 1.9
SCAF11Q99590 AP003733.1-201ENST00000491725 852 ntBASIC26.9■■□□□ 1.9
SCAF11Q99590 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC26.9■■□□□ 1.9
SCAF11Q99590 AC092865.5-201ENST00000545435 363 ntBASIC26.9■■□□□ 1.9
SCAF11Q99590 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC26.9■■□□□ 1.9
SCAF11Q99590 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC26.9■■□□□ 1.9
SCAF11Q99590 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 NSUN5P1-202ENST00000421140 1535 ntBASIC26.9■■□□□ 1.9
SCAF11Q99590 NSUN5P2-203ENST00000457352 1529 ntBASIC26.9■■□□□ 1.9
SCAF11Q99590 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCAF11Q99590 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SCAF11Q99590 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SCAF11Q99590 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC26.89■■□□□ 1.9
SCAF11Q99590 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SCAF11Q99590 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC26.89■■□□□ 1.9
SCAF11Q99590 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC26.89■■□□□ 1.9
SCAF11Q99590 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
SCAF11Q99590 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
SCAF11Q99590 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC26.89■■□□□ 1.9
SCAF11Q99590 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC26.89■■□□□ 1.9
SCAF11Q99590 CCNC-219ENST00000627680 896 ntTSL 5 BASIC26.89■■□□□ 1.9
SCAF11Q99590 ABBA01031661.1-201ENST00000634362 1253 ntBASIC26.89■■□□□ 1.9
SCAF11Q99590 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.89■■□□□ 1.9
SCAF11Q99590 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF11Q99590 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC26.89■■□□□ 1.89
SCAF11Q99590 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC26.89■■□□□ 1.89
SCAF11Q99590 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCAF11Q99590 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC26.88■■□□□ 1.89
SCAF11Q99590 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF11Q99590 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC26.88■■□□□ 1.89
SCAF11Q99590 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.88■■□□□ 1.89
SCAF11Q99590 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF11Q99590 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF11Q99590 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC26.88■■□□□ 1.89
SCAF11Q99590 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF11Q99590 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF11Q99590 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC26.88■■□□□ 1.89
SCAF11Q99590 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF11Q99590 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
SCAF11Q99590 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC26.88■■□□□ 1.89
SCAF11Q99590 KRT8P3-201ENST00000519669 1449 ntBASIC26.88■■□□□ 1.89
SCAF11Q99590 AC243591.1-201ENST00000452967 1364 ntBASIC26.88■■□□□ 1.89
SCAF11Q99590 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SCAF11Q99590 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC26.87■■□□□ 1.89
SCAF11Q99590 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC26.87■■□□□ 1.89
SCAF11Q99590 KRT18P67-201ENST00000432816 1264 ntBASIC26.87■■□□□ 1.89
SCAF11Q99590 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC26.87■■□□□ 1.89
SCAF11Q99590 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC26.87■■□□□ 1.89
SCAF11Q99590 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC26.87■■□□□ 1.89
SCAF11Q99590 TEN1-204ENST00000588202 862 ntTSL 3 BASIC26.87■■□□□ 1.89
SCAF11Q99590 MIR7706-201ENST00000613747 67 ntBASIC26.87■■□□□ 1.89
SCAF11Q99590 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SCAF11Q99590 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC26.87■■□□□ 1.89
SCAF11Q99590 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.87■■□□□ 1.89
SCAF11Q99590 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC26.87■■□□□ 1.89
SCAF11Q99590 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SCAF11Q99590 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC26.87■■□□□ 1.89
SCAF11Q99590 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC26.87■■□□□ 1.89
SCAF11Q99590 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
SCAF11Q99590 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SCAF11Q99590 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
SCAF11Q99590 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SCAF11Q99590 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SCAF11Q99590 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.86■■□□□ 1.89
SCAF11Q99590 MOK-208ENST00000519058 917 ntTSL 2 BASIC26.86■■□□□ 1.89
SCAF11Q99590 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms