Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF544Q6NX49 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 AC124016.1-201ENST00000609552 612 ntBASIC17.22■□□□□ 0.35
ZNF544Q6NX49 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ZNF544Q6NX49 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 AC110285.5-201ENST00000611501 352 ntBASIC17.21■□□□□ 0.35
ZNF544Q6NX49 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 AL023875.1-201ENST00000640777 796 ntBASIC17.21■□□□□ 0.35
ZNF544Q6NX49 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 AC090164.3-201ENST00000610780 2143 ntBASIC17.21■□□□□ 0.35
ZNF544Q6NX49 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.21■□□□□ 0.35
ZNF544Q6NX49 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms