Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.12■□□□□ 0.33
RBM48Q5RL73 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.12■□□□□ 0.33
RBM48Q5RL73 AL139246.5-201ENST00000606645 996 ntBASIC17.12■□□□□ 0.33
RBM48Q5RL73 AC013268.1-206ENST00000638368 961 ntBASIC17.12■□□□□ 0.33
RBM48Q5RL73 AC112229.1-201ENST00000639295 961 ntBASIC17.12■□□□□ 0.33
RBM48Q5RL73 MYC-208ENST00000641036 567 ntBASIC17.12■□□□□ 0.33
RBM48Q5RL73 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 HEIH-201ENST00000623091 1652 ntBASIC17.12■□□□□ 0.33
RBM48Q5RL73 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.12■□□□□ 0.33
RBM48Q5RL73 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RBM48Q5RL73 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
RBM48Q5RL73 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBM48Q5RL73 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.11■□□□□ 0.33
RBM48Q5RL73 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RBM48Q5RL73 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBM48Q5RL73 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 AL499627.1-201ENST00000569373 2188 ntBASIC17.1■□□□□ 0.33
RBM48Q5RL73 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 FLJ13224-201ENST00000313737 1514 ntBASIC17.1■□□□□ 0.33
RBM48Q5RL73 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBM48Q5RL73 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.1■□□□□ 0.33
RBM48Q5RL73 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms