Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2NP61088 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2NP61088 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
UBE2NP61088 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
UBE2NP61088 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2NP61088 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
UBE2NP61088 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2NP61088 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2NP61088 FAM87A-204ENST00000613235 858 ntBASIC16.49■□□□□ 0.23
UBE2NP61088 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
UBE2NP61088 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2NP61088 OR6D1P-202ENST00000641007 5290 ntBASIC16.49■□□□□ 0.23
UBE2NP61088 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBE2NP61088 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2NP61088 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBE2NP61088 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
UBE2NP61088 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
UBE2NP61088 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.48■□□□□ 0.23
UBE2NP61088 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.48■□□□□ 0.23
UBE2NP61088 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UBE2NP61088 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.48■□□□□ 0.23
UBE2NP61088 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2NP61088 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2NP61088 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
UBE2NP61088 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2NP61088 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.48■□□□□ 0.23
UBE2NP61088 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.48■□□□□ 0.23
UBE2NP61088 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.48■□□□□ 0.23
UBE2NP61088 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
UBE2NP61088 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UBE2NP61088 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
UBE2NP61088 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.48■□□□□ 0.23
UBE2NP61088 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2NP61088 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2NP61088 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.47■□□□□ 0.23
UBE2NP61088 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBE2NP61088 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 AL161938.1-201ENST00000569833 2180 ntBASIC16.47■□□□□ 0.23
UBE2NP61088 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.47■□□□□ 0.23
UBE2NP61088 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2NP61088 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2NP61088 MCCD1P1-208ENST00000445732 328 ntBASIC16.47■□□□□ 0.23
UBE2NP61088 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.47■□□□□ 0.23
UBE2NP61088 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.47■□□□□ 0.23
UBE2NP61088 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBE2NP61088 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.47■□□□□ 0.23
UBE2NP61088 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
UBE2NP61088 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.47■□□□□ 0.23
UBE2NP61088 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
UBE2NP61088 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2NP61088 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.46■□□□□ 0.23
UBE2NP61088 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBE2NP61088 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBE2NP61088 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2NP61088 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2NP61088 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2NP61088 AC005521.1-201ENST00000393351 872 ntBASIC16.46■□□□□ 0.23
UBE2NP61088 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2NP61088 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2NP61088 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBE2NP61088 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2NP61088 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms