Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB3P54753 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.58■□□□□ 0.73
EPHB3P54753 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB3P54753 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB3P54753 AL162741.1-201ENST00000565563 1558 ntBASIC19.58■□□□□ 0.73
EPHB3P54753 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB3P54753 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.58■□□□□ 0.73
EPHB3P54753 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB3P54753 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHB3P54753 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB3P54753 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
EPHB3P54753 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHB3P54753 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.58■□□□□ 0.72
EPHB3P54753 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
EPHB3P54753 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB3P54753 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB3P54753 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB3P54753 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
EPHB3P54753 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB3P54753 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHB3P54753 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
EPHB3P54753 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB3P54753 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
EPHB3P54753 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB3P54753 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 DUSP5P1-201ENST00000441325 1139 ntBASIC19.57■□□□□ 0.72
EPHB3P54753 TSSC2-201ENST00000450217 709 ntBASIC19.57■□□□□ 0.72
EPHB3P54753 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.57■□□□□ 0.72
EPHB3P54753 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.57■□□□□ 0.72
EPHB3P54753 AC092119.3-201ENST00000612618 583 ntBASIC19.57■□□□□ 0.72
EPHB3P54753 NPAP1P7-201ENST00000613027 823 ntBASIC19.57■□□□□ 0.72
EPHB3P54753 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHB3P54753 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB3P54753 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB3P54753 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.57■□□□□ 0.72
EPHB3P54753 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHB3P54753 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.56■□□□□ 0.72
EPHB3P54753 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 MIR662-201ENST00000384847 95 ntBASIC19.56■□□□□ 0.72
EPHB3P54753 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EPHB3P54753 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHB3P54753 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.56■□□□□ 0.72
EPHB3P54753 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.56■□□□□ 0.72
EPHB3P54753 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
EPHB3P54753 AC006333.2-201ENST00000607957 2099 ntBASIC19.56■□□□□ 0.72
EPHB3P54753 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHB3P54753 AC093525.10-201ENST00000625130 1569 ntBASIC19.56■□□□□ 0.72
EPHB3P54753 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
EPHB3P54753 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.56■□□□□ 0.72
EPHB3P54753 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHB3P54753 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHB3P54753 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EPHB3P54753 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
EPHB3P54753 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB3P54753 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 AL450487.1-201ENST00000426799 995 ntBASIC19.55■□□□□ 0.72
EPHB3P54753 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.55■□□□□ 0.72
EPHB3P54753 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.55■□□□□ 0.72
EPHB3P54753 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB3P54753 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.55■□□□□ 0.72
EPHB3P54753 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
EPHB3P54753 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.55■□□□□ 0.72
EPHB3P54753 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.55■□□□□ 0.72
EPHB3P54753 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPHB3P54753 AC092329.2-201ENST00000598402 547 ntBASIC19.55■□□□□ 0.72
EPHB3P54753 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.55■□□□□ 0.72
EPHB3P54753 AL032819.2-201ENST00000624543 2162 ntBASIC19.55■□□□□ 0.72
EPHB3P54753 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
EPHB3P54753 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.55■□□□□ 0.72
EPHB3P54753 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms