Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RARAP10276 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.7■□□□□ 0.74
RARAP10276 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RARAP10276 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.7■□□□□ 0.74
RARAP10276 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RARAP10276 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RARAP10276 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.7■□□□□ 0.74
RARAP10276 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.7■□□□□ 0.74
RARAP10276 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.7■□□□□ 0.74
RARAP10276 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.7■□□□□ 0.74
RARAP10276 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.7■□□□□ 0.74
RARAP10276 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RARAP10276 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RARAP10276 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RARAP10276 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.69■□□□□ 0.74
RARAP10276 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RARAP10276 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RARAP10276 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
RARAP10276 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
RARAP10276 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.69■□□□□ 0.74
RARAP10276 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.69■□□□□ 0.74
RARAP10276 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.69■□□□□ 0.74
RARAP10276 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.69■□□□□ 0.74
RARAP10276 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RARAP10276 AC233702.5-201ENST00000584107 538 ntBASIC19.69■□□□□ 0.74
RARAP10276 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.69■□□□□ 0.74
RARAP10276 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.69■□□□□ 0.74
RARAP10276 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.69■□□□□ 0.74
RARAP10276 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 AL133373.2-201ENST00000623187 2828 ntBASIC19.69■□□□□ 0.74
RARAP10276 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RARAP10276 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.69■□□□□ 0.74
RARAP10276 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RARAP10276 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RARAP10276 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RARAP10276 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.68■□□□□ 0.74
RARAP10276 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.68■□□□□ 0.74
RARAP10276 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.68■□□□□ 0.74
RARAP10276 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.68■□□□□ 0.74
RARAP10276 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.68■□□□□ 0.74
RARAP10276 AC012618.2-201ENST00000428058 849 ntBASIC19.68■□□□□ 0.74
RARAP10276 FAM207BP-201ENST00000447172 505 ntBASIC19.68■□□□□ 0.74
RARAP10276 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RARAP10276 AC113410.3-201ENST00000623366 203 ntBASIC19.68■□□□□ 0.74
RARAP10276 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RARAP10276 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RARAP10276 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.68■□□□□ 0.74
RARAP10276 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RARAP10276 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.67■□□□□ 0.74
RARAP10276 FSCN1P1-201ENST00000568912 1481 ntBASIC19.67■□□□□ 0.74
RARAP10276 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RARAP10276 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.67■□□□□ 0.74
RARAP10276 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RARAP10276 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms