Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 IRX1P1-201ENST00000438849 1838 ntBASIC17.02■□□□□ 0.32
FREM3P0C091 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.02■□□□□ 0.32
FREM3P0C091 SEC1P-202ENST00000473944 940 ntBASIC17.02■□□□□ 0.32
FREM3P0C091 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
FREM3P0C091 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.02■□□□□ 0.32
FREM3P0C091 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.02■□□□□ 0.32
FREM3P0C091 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
FREM3P0C091 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.02■□□□□ 0.31
FREM3P0C091 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.02■□□□□ 0.31
FREM3P0C091 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
FREM3P0C091 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.02■□□□□ 0.31
FREM3P0C091 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 AL512604.3-201ENST00000569583 964 ntBASIC17.02■□□□□ 0.31
FREM3P0C091 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FREM3P0C091 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.02■□□□□ 0.31
FREM3P0C091 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
FREM3P0C091 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 AC005332.1-201ENST00000577698 1310 ntBASIC17.01■□□□□ 0.31
FREM3P0C091 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
FREM3P0C091 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.01■□□□□ 0.31
FREM3P0C091 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.01■□□□□ 0.31
FREM3P0C091 HEIH-201ENST00000623091 1652 ntBASIC17.01■□□□□ 0.31
FREM3P0C091 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.01■□□□□ 0.31
FREM3P0C091 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.01■□□□□ 0.31
FREM3P0C091 RNF152P1-201ENST00000397754 604 ntBASIC17.01■□□□□ 0.31
FREM3P0C091 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.01■□□□□ 0.31
FREM3P0C091 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.01■□□□□ 0.31
FREM3P0C091 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.01■□□□□ 0.31
FREM3P0C091 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
FREM3P0C091 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.01■□□□□ 0.31
FREM3P0C091 CROCCP3-202ENST00000420820 1947 ntBASIC17.01■□□□□ 0.31
FREM3P0C091 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.01■□□□□ 0.31
FREM3P0C091 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.01■□□□□ 0.31
FREM3P0C091 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FREM3P0C091 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FREM3P0C091 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FREM3P0C091 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FREM3P0C091 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17■□□□□ 0.31
FREM3P0C091 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
FREM3P0C091 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 TSPY5P-201ENST00000426936 936 ntBASIC17■□□□□ 0.31
FREM3P0C091 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17■□□□□ 0.31
FREM3P0C091 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 VENTXP5-201ENST00000523979 775 ntBASIC17■□□□□ 0.31
FREM3P0C091 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FREM3P0C091 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
FREM3P0C091 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
FREM3P0C091 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17■□□□□ 0.31
FREM3P0C091 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17■□□□□ 0.31
FREM3P0C091 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17■□□□□ 0.31
FREM3P0C091 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
FREM3P0C091 AC139887.4-201ENST00000607877 719 ntBASIC17■□□□□ 0.31
FREM3P0C091 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FREM3P0C091 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17■□□□□ 0.31
FREM3P0C091 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 KRT8P3-201ENST00000519669 1449 ntBASIC17■□□□□ 0.31
FREM3P0C091 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FREM3P0C091 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FREM3P0C091 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
FREM3P0C091 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms