Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.53■□□□□ 0.4
HCN1O60741 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.53■□□□□ 0.4
HCN1O60741 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
HCN1O60741 AC004951.3-201ENST00000418645 1148 ntBASIC17.53■□□□□ 0.4
HCN1O60741 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HCN1O60741 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.53■□□□□ 0.4
HCN1O60741 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.53■□□□□ 0.4
HCN1O60741 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
HCN1O60741 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.53■□□□□ 0.4
HCN1O60741 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.53■□□□□ 0.4
HCN1O60741 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.53■□□□□ 0.4
HCN1O60741 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HCN1O60741 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HCN1O60741 KRT8P9-201ENST00000558927 1449 ntBASIC17.53■□□□□ 0.4
HCN1O60741 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 RCC2P6-201ENST00000526625 1557 ntBASIC17.53■□□□□ 0.4
HCN1O60741 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCN1O60741 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HCN1O60741 LINC01568-207ENST00000641790 1380 ntBASIC17.53■□□□□ 0.4
HCN1O60741 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HCN1O60741 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCN1O60741 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCN1O60741 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.52■□□□□ 0.4
HCN1O60741 KRT18P22-201ENST00000402024 1347 ntBASIC17.52■□□□□ 0.4
HCN1O60741 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HCN1O60741 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
HCN1O60741 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCN1O60741 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.52■□□□□ 0.4
HCN1O60741 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.52■□□□□ 0.4
HCN1O60741 AL390955.1-201ENST00000428694 934 ntBASIC17.52■□□□□ 0.4
HCN1O60741 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.52■□□□□ 0.4
HCN1O60741 KRT18P21-201ENST00000515767 1272 ntBASIC17.52■□□□□ 0.4
HCN1O60741 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HCN1O60741 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCN1O60741 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.52■□□□□ 0.4
HCN1O60741 C2orf69P3-201ENST00000565542 1120 ntBASIC17.52■□□□□ 0.4
HCN1O60741 AP000692.2-201ENST00000608391 879 ntBASIC17.52■□□□□ 0.4
HCN1O60741 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.52■□□□□ 0.4
HCN1O60741 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCN1O60741 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HCN1O60741 AL049812.1-201ENST00000432563 2267 ntBASIC17.52■□□□□ 0.4
HCN1O60741 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
HCN1O60741 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HCN1O60741 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HCN1O60741 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
HCN1O60741 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.52■□□□□ 0.39
HCN1O60741 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
HCN1O60741 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.52■□□□□ 0.39
HCN1O60741 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HCN1O60741 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HCN1O60741 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
HCN1O60741 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HCN1O60741 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 AC007613.1-201ENST00000572811 2597 ntBASIC17.51■□□□□ 0.39
HCN1O60741 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.51■□□□□ 0.39
HCN1O60741 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.51■□□□□ 0.39
HCN1O60741 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
HCN1O60741 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HCN1O60741 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.51■□□□□ 0.39
HCN1O60741 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.51■□□□□ 0.39
HCN1O60741 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 AC097488.1-201ENST00000507834 756 ntBASIC17.51■□□□□ 0.39
HCN1O60741 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.51■□□□□ 0.39
HCN1O60741 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.51■□□□□ 0.39
HCN1O60741 AC011298.2-201ENST00000617989 482 ntBASIC17.51■□□□□ 0.39
HCN1O60741 AC005363.2-201ENST00000618631 242 ntBASIC17.51■□□□□ 0.39
HCN1O60741 AC010947.1-201ENST00000623454 693 ntBASIC17.51■□□□□ 0.39
HCN1O60741 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.51■□□□□ 0.39
HCN1O60741 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.51■□□□□ 0.39
HCN1O60741 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.51■□□□□ 0.39
HCN1O60741 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.51■□□□□ 0.39
HCN1O60741 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HCN1O60741 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HCN1O60741 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
HCN1O60741 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCN1O60741 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.5■□□□□ 0.39
HCN1O60741 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms