Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC11O43248 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC11O43248 TSSC2-201ENST00000450217 709 ntBASIC19.09■□□□□ 0.65
HOXC11O43248 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC11O43248 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.09■□□□□ 0.65
HOXC11O43248 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC11O43248 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HOXC11O43248 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HOXC11O43248 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC11O43248 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC11O43248 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC11O43248 AC016734.2-201ENST00000624325 1377 ntBASIC19.08■□□□□ 0.65
HOXC11O43248 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC11O43248 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HOXC11O43248 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.08■□□□□ 0.65
HOXC11O43248 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HOXC11O43248 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC11O43248 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.08■□□□□ 0.65
HOXC11O43248 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HOXC11O43248 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC11O43248 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
HOXC11O43248 BX276092.5-203ENST00000456199 560 ntBASIC19.08■□□□□ 0.64
HOXC11O43248 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC11O43248 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC11O43248 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC11O43248 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC11O43248 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC11O43248 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC11O43248 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC11O43248 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC11O43248 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC11O43248 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC11O43248 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC11O43248 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 AC006333.2-201ENST00000607957 2099 ntBASIC19.07■□□□□ 0.64
HOXC11O43248 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC11O43248 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 KRT8P26-201ENST00000534154 1276 ntBASIC19.07■□□□□ 0.64
HOXC11O43248 AC092119.3-201ENST00000612618 583 ntBASIC19.07■□□□□ 0.64
HOXC11O43248 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC11O43248 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HOXC11O43248 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HOXC11O43248 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC11O43248 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HOXC11O43248 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.07■□□□□ 0.64
HOXC11O43248 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC11O43248 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
HOXC11O43248 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
HOXC11O43248 AL032819.2-201ENST00000624543 2162 ntBASIC19.06■□□□□ 0.64
HOXC11O43248 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXC11O43248 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
HOXC11O43248 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HOXC11O43248 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HOXC11O43248 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 AL450487.1-201ENST00000426799 995 ntBASIC19.06■□□□□ 0.64
HOXC11O43248 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.06■□□□□ 0.64
HOXC11O43248 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXC11O43248 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.06■□□□□ 0.64
HOXC11O43248 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HOXC11O43248 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
HOXC11O43248 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HOXC11O43248 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
HOXC11O43248 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC11O43248 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC11O43248 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms