Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.38■■□□□ 1.17
FOXN1O15353 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 AKR1C7P-201ENST00000305623 895 ntBASIC22.38■■□□□ 1.17
FOXN1O15353 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
FOXN1O15353 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
FOXN1O15353 AC073648.2-201ENST00000510116 352 ntBASIC22.38■■□□□ 1.17
FOXN1O15353 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.38■■□□□ 1.17
FOXN1O15353 AC138894.3-201ENST00000603787 634 ntBASIC22.38■■□□□ 1.17
FOXN1O15353 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
FOXN1O15353 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXN1O15353 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.37■■□□□ 1.17
FOXN1O15353 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
FOXN1O15353 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.37■■□□□ 1.17
FOXN1O15353 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
FOXN1O15353 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
FOXN1O15353 TOB2P1-201ENST00000469761 992 ntBASIC22.37■■□□□ 1.17
FOXN1O15353 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.37■■□□□ 1.17
FOXN1O15353 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.37■■□□□ 1.17
FOXN1O15353 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.37■■□□□ 1.17
FOXN1O15353 AC064862.7-201ENST00000604520 867 ntBASIC22.37■■□□□ 1.17
FOXN1O15353 AL390719.2-201ENST00000606993 987 ntBASIC22.37■■□□□ 1.17
FOXN1O15353 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
FOXN1O15353 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 TFP1-202ENST00000475455 1573 ntBASIC22.37■■□□□ 1.17
FOXN1O15353 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
FOXN1O15353 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.37■■□□□ 1.17
FOXN1O15353 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXN1O15353 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXN1O15353 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXN1O15353 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
FOXN1O15353 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FOXN1O15353 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXN1O15353 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXN1O15353 RNPS1P1-201ENST00000507437 918 ntBASIC22.36■■□□□ 1.17
FOXN1O15353 AP001160.2-201ENST00000596071 487 ntBASIC22.36■■□□□ 1.17
FOXN1O15353 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
FOXN1O15353 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
FOXN1O15353 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.36■■□□□ 1.17
FOXN1O15353 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXN1O15353 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.36■■□□□ 1.17
FOXN1O15353 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
FOXN1O15353 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.35■■□□□ 1.17
FOXN1O15353 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
FOXN1O15353 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.35■■□□□ 1.17
FOXN1O15353 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.35■■□□□ 1.17
FOXN1O15353 TP73-AS1-207ENST00000624167 988 ntBASIC22.35■■□□□ 1.17
FOXN1O15353 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.35■■□□□ 1.17
FOXN1O15353 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
FOXN1O15353 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.35■■□□□ 1.17
FOXN1O15353 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.35■■□□□ 1.17
FOXN1O15353 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXN1O15353 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXN1O15353 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
FOXN1O15353 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
FOXN1O15353 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXN1O15353 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXN1O15353 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.34■■□□□ 1.17
FOXN1O15353 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXN1O15353 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.34■■□□□ 1.17
FOXN1O15353 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 AL773604.1-201ENST00000617417 272 ntBASIC22.34■■□□□ 1.17
FOXN1O15353 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
FOXN1O15353 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.34■■□□□ 1.17
FOXN1O15353 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXN1O15353 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXN1O15353 AC116351.2-201ENST00000606540 1585 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms