Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.83■■■□□ 2.21
PLEKHD1A6NEE1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 MINOS1P3-201ENST00000457048 203 ntBASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 AC011840.4-201ENST00000578471 627 ntBASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 AC112907.3-201ENST00000577781 2400 ntBASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PLEKHD1A6NEE1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 SLC25A1P1-201ENST00000528351 927 ntBASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 PWWP2AP1-201ENST00000429776 2273 ntBASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PLEKHD1A6NEE1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
PLEKHD1A6NEE1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 KRT18P13-201ENST00000400056 1290 ntBASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 TREX1-205ENST00000625293 1783 ntBASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC28.79■■■□□ 2.2
PLEKHD1A6NEE1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 AL031284.1-201ENST00000419297 478 ntBASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 KRT18P67-201ENST00000432816 1264 ntBASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 BNIP3P18-201ENST00000593976 575 ntBASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PLEKHD1A6NEE1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PLEKHD1A6NEE1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms