Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Clcf1Q9QZM3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Clcf1Q9QZM3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.68■□□□□ 0.9
Clcf1Q9QZM3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.68■□□□□ 0.9
Clcf1Q9QZM3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcf1Q9QZM3 Mir6538-201ENSMUST00000183713 110 ntBASIC20.67■□□□□ 0.9
Clcf1Q9QZM3 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.67■□□□□ 0.9
Clcf1Q9QZM3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcf1Q9QZM3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcf1Q9QZM3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcf1Q9QZM3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcf1Q9QZM3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcf1Q9QZM3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcf1Q9QZM3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.65■□□□□ 0.9
Clcf1Q9QZM3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcf1Q9QZM3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcf1Q9QZM3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcf1Q9QZM3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcf1Q9QZM3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.63■□□□□ 0.89
Clcf1Q9QZM3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clcf1Q9QZM3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.63■□□□□ 0.89
Clcf1Q9QZM3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcf1Q9QZM3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcf1Q9QZM3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clcf1Q9QZM3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Clcf1Q9QZM3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcf1Q9QZM3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcf1Q9QZM3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcf1Q9QZM3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcf1Q9QZM3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcf1Q9QZM3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcf1Q9QZM3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcf1Q9QZM3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcf1Q9QZM3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.61■□□□□ 0.89
Clcf1Q9QZM3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcf1Q9QZM3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.6■□□□□ 0.89
Clcf1Q9QZM3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcf1Q9QZM3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Clcf1Q9QZM3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clcf1Q9QZM3 Gm45364-201ENSMUST00000210883 159 ntBASIC20.59■□□□□ 0.89
Clcf1Q9QZM3 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.59■□□□□ 0.89
Clcf1Q9QZM3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clcf1Q9QZM3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.59■□□□□ 0.89
Clcf1Q9QZM3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.59■□□□□ 0.89
Clcf1Q9QZM3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.59■□□□□ 0.89
Clcf1Q9QZM3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcf1Q9QZM3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clcf1Q9QZM3 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.58■□□□□ 0.89
Clcf1Q9QZM3 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.58■□□□□ 0.89
Clcf1Q9QZM3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcf1Q9QZM3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcf1Q9QZM3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Clcf1Q9QZM3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
Clcf1Q9QZM3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clcf1Q9QZM3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcf1Q9QZM3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clcf1Q9QZM3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcf1Q9QZM3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.56■□□□□ 0.88
Clcf1Q9QZM3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clcf1Q9QZM3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcf1Q9QZM3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcf1Q9QZM3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.54■□□□□ 0.88
Clcf1Q9QZM3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Clcf1Q9QZM3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clcf1Q9QZM3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcf1Q9QZM3 Scarna2-201ENSMUST00000157560 414 ntBASIC20.52■□□□□ 0.88
Clcf1Q9QZM3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcf1Q9QZM3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clcf1Q9QZM3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.51■□□□□ 0.87
Clcf1Q9QZM3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clcf1Q9QZM3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 Gm9806-201ENSMUST00000051080 552 ntBASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcf1Q9QZM3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Clcf1Q9QZM3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcf1Q9QZM3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.47■□□□□ 0.87
Clcf1Q9QZM3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcf1Q9QZM3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcf1Q9QZM3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcf1Q9QZM3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms