Protein–RNA interactions for Protein: Q9EPB8

Vmn1r54, Vomeronasal type-1 receptor 54, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r54Q9EPB8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vmn1r54Q9EPB8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vmn1r54Q9EPB8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vmn1r54Q9EPB8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Vmn1r54Q9EPB8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vmn1r54Q9EPB8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vmn1r54Q9EPB8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Vmn1r54Q9EPB8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.56■□□□□ 0.56
Vmn1r54Q9EPB8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vmn1r54Q9EPB8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 Nkain2-201ENSMUST00000092602 558 ntBASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vmn1r54Q9EPB8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Gm30023-201ENSMUST00000197970 889 ntBASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vmn1r54Q9EPB8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vmn1r54Q9EPB8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vmn1r54Q9EPB8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vmn1r54Q9EPB8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vmn1r54Q9EPB8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.52■□□□□ 0.56
Vmn1r54Q9EPB8 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.52■□□□□ 0.56
Vmn1r54Q9EPB8 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.52■□□□□ 0.56
Vmn1r54Q9EPB8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vmn1r54Q9EPB8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vmn1r54Q9EPB8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vmn1r54Q9EPB8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vmn1r54Q9EPB8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vmn1r54Q9EPB8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vmn1r54Q9EPB8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.51■□□□□ 0.55
Vmn1r54Q9EPB8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vmn1r54Q9EPB8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Vmn1r54Q9EPB8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vmn1r54Q9EPB8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vmn1r54Q9EPB8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vmn1r54Q9EPB8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.49■□□□□ 0.55
Vmn1r54Q9EPB8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vmn1r54Q9EPB8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vmn1r54Q9EPB8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Vmn1r54Q9EPB8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vmn1r54Q9EPB8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vmn1r54Q9EPB8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vmn1r54Q9EPB8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vmn1r54Q9EPB8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Vmn1r54Q9EPB8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.47■□□□□ 0.55
Vmn1r54Q9EPB8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vmn1r54Q9EPB8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vmn1r54Q9EPB8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vmn1r54Q9EPB8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.46■□□□□ 0.55
Vmn1r54Q9EPB8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 Gm6821-201ENSMUST00000107540 542 ntBASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vmn1r54Q9EPB8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r54Q9EPB8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r54Q9EPB8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r54Q9EPB8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r54Q9EPB8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r54Q9EPB8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r54Q9EPB8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r54Q9EPB8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r54Q9EPB8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r54Q9EPB8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r54Q9EPB8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Vmn1r54Q9EPB8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r54Q9EPB8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r54Q9EPB8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r54Q9EPB8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r54Q9EPB8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Vmn1r54Q9EPB8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms