Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Smc1bQ920F6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Smc1bQ920F6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Smc1bQ920F6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Smc1bQ920F6 Gm14523-201ENSMUST00000117260 558 ntBASIC26,36■■□□□ 1,81
Smc1bQ920F6 Gm22567-201ENSMUST00000175542 342 ntBASIC26,36■■□□□ 1,81
Smc1bQ920F6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Smc1bQ920F6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Smc1bQ920F6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26,34■■□□□ 1,81
Smc1bQ920F6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26,33■■□□□ 1,81
Smc1bQ920F6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26,33■■□□□ 1,81
Smc1bQ920F6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26,33■■□□□ 1,81
Smc1bQ920F6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,8
Smc1bQ920F6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26,32■■□□□ 1,8
Smc1bQ920F6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26,3■■□□□ 1,8
Smc1bQ920F6 Gm5812-201ENSMUST00000061073 957 ntBASIC26,3■■□□□ 1,8
Smc1bQ920F6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26,29■■□□□ 1,8
Smc1bQ920F6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26,29■■□□□ 1,8
Smc1bQ920F6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26,28■■□□□ 1,8
Smc1bQ920F6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26,28■■□□□ 1,8
Smc1bQ920F6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26,28■■□□□ 1,8
Smc1bQ920F6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26,28■■□□□ 1,8
Smc1bQ920F6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Smc1bQ920F6 Gm5067-201ENSMUST00000170449 1009 ntBASIC26,26■■□□□ 1,79
Smc1bQ920F6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26,26■■□□□ 1,79
Smc1bQ920F6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
Smc1bQ920F6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26,25■■□□□ 1,79
Smc1bQ920F6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26,25■■□□□ 1,79
Smc1bQ920F6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Smc1bQ920F6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Smc1bQ920F6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Smc1bQ920F6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26,24■■□□□ 1,79
Smc1bQ920F6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26,24■■□□□ 1,79
Smc1bQ920F6 Gm13889-201ENSMUST00000099689 1386 ntBASIC26,24■■□□□ 1,79
Smc1bQ920F6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26,24■■□□□ 1,79
Smc1bQ920F6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26,24■■□□□ 1,79
Smc1bQ920F6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Smc1bQ920F6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Smc1bQ920F6 Gm12818-201ENSMUST00000117562 1349 ntBASIC26,23■■□□□ 1,79
Smc1bQ920F6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26,23■■□□□ 1,79
Smc1bQ920F6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26,22■■□□□ 1,79
Smc1bQ920F6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26,22■■□□□ 1,79
Smc1bQ920F6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26,22■■□□□ 1,79
Smc1bQ920F6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26,22■■□□□ 1,79
Smc1bQ920F6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26,22■■□□□ 1,79
Smc1bQ920F6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26,22■■□□□ 1,79
Smc1bQ920F6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26,22■■□□□ 1,79
Smc1bQ920F6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Smc1bQ920F6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Smc1bQ920F6 Gm37136-201ENSMUST00000194368 194 ntBASIC26,21■■□□□ 1,79
Smc1bQ920F6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26,21■■□□□ 1,79
Smc1bQ920F6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Smc1bQ920F6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26,19■■□□□ 1,78
Smc1bQ920F6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Smc1bQ920F6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Smc1bQ920F6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26,18■■□□□ 1,78
Smc1bQ920F6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26,18■■□□□ 1,78
Smc1bQ920F6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26,18■■□□□ 1,78
Smc1bQ920F6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26,17■■□□□ 1,78
Smc1bQ920F6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26,17■■□□□ 1,78
Smc1bQ920F6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26,17■■□□□ 1,78
Smc1bQ920F6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26,17■■□□□ 1,78
Smc1bQ920F6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Smc1bQ920F6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Smc1bQ920F6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26,16■■□□□ 1,78
Smc1bQ920F6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Smc1bQ920F6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Smc1bQ920F6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26,15■■□□□ 1,78
Smc1bQ920F6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,78
Smc1bQ920F6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,78
Smc1bQ920F6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26,14■■□□□ 1,78
Smc1bQ920F6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26,14■■□□□ 1,78
Smc1bQ920F6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,77
Smc1bQ920F6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Smc1bQ920F6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Smc1bQ920F6 Gm5921-201ENSMUST00000075898 882 ntBASIC26,13■■□□□ 1,77
Smc1bQ920F6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Smc1bQ920F6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Smc1bQ920F6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Smc1bQ920F6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26,12■■□□□ 1,77
Smc1bQ920F6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26,11■■□□□ 1,77
Smc1bQ920F6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26,11■■□□□ 1,77
Smc1bQ920F6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Smc1bQ920F6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
Smc1bQ920F6 Gm10420-201ENSMUST00000121713 882 ntBASIC26,1■■□□□ 1,77
Smc1bQ920F6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26,1■■□□□ 1,77
Smc1bQ920F6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Smc1bQ920F6 Gm9910-201ENSMUST00000195385 1550 ntBASIC26,09■■□□□ 1,77
Smc1bQ920F6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26,09■■□□□ 1,77
Smc1bQ920F6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26,09■■□□□ 1,77
Smc1bQ920F6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Smc1bQ920F6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26,08■■□□□ 1,77
Smc1bQ920F6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Smc1bQ920F6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,76
Smc1bQ920F6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26,07■■□□□ 1,76
Smc1bQ920F6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26,07■■□□□ 1,76
Smc1bQ920F6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26,07■■□□□ 1,76
Smc1bQ920F6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Smc1bQ920F6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26,07■■□□□ 1,76
Smc1bQ920F6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
Retrieved 100 of 76,532 protein–RNA pairs in 13,5 ms