Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.2■□□□□ 0.98
H2afjQ8R1M2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2afjQ8R1M2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
H2afjQ8R1M2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
H2afjQ8R1M2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.19■□□□□ 0.98
H2afjQ8R1M2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2afjQ8R1M2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
H2afjQ8R1M2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H2afjQ8R1M2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H2afjQ8R1M2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H2afjQ8R1M2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.17■□□□□ 0.98
H2afjQ8R1M2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2afjQ8R1M2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2afjQ8R1M2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2afjQ8R1M2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2afjQ8R1M2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2afjQ8R1M2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
H2afjQ8R1M2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2afjQ8R1M2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
H2afjQ8R1M2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2afjQ8R1M2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
H2afjQ8R1M2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
H2afjQ8R1M2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2afjQ8R1M2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2afjQ8R1M2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2afjQ8R1M2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.13■□□□□ 0.97
H2afjQ8R1M2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afjQ8R1M2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
H2afjQ8R1M2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afjQ8R1M2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
H2afjQ8R1M2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
H2afjQ8R1M2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afjQ8R1M2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H2afjQ8R1M2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afjQ8R1M2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afjQ8R1M2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
H2afjQ8R1M2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afjQ8R1M2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H2afjQ8R1M2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2afjQ8R1M2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afjQ8R1M2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afjQ8R1M2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afjQ8R1M2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afjQ8R1M2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
H2afjQ8R1M2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2afjQ8R1M2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
H2afjQ8R1M2 Nkain2-201ENSMUST00000092602 558 ntBASIC21.08■□□□□ 0.97
H2afjQ8R1M2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
H2afjQ8R1M2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
H2afjQ8R1M2 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2afjQ8R1M2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.06■□□□□ 0.96
H2afjQ8R1M2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.06■□□□□ 0.96
H2afjQ8R1M2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
H2afjQ8R1M2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afjQ8R1M2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H2afjQ8R1M2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H2afjQ8R1M2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afjQ8R1M2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.05■□□□□ 0.96
H2afjQ8R1M2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H2afjQ8R1M2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afjQ8R1M2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afjQ8R1M2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afjQ8R1M2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Particl-201ENSMUST00000205370 1560 ntBASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afjQ8R1M2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afjQ8R1M2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afjQ8R1M2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.02■□□□□ 0.96
H2afjQ8R1M2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
H2afjQ8R1M2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
H2afjQ8R1M2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
H2afjQ8R1M2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afjQ8R1M2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afjQ8R1M2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.01■□□□□ 0.95
H2afjQ8R1M2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afjQ8R1M2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afjQ8R1M2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
H2afjQ8R1M2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afjQ8R1M2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
H2afjQ8R1M2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
H2afjQ8R1M2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afjQ8R1M2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afjQ8R1M2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afjQ8R1M2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afjQ8R1M2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afjQ8R1M2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afjQ8R1M2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afjQ8R1M2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms