Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Abca8bQ8K440 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Abca8bQ8K440 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Abca8bQ8K440 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
Abca8bQ8K440 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Abca8bQ8K440 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC35.53■■■■□ 3.28
Abca8bQ8K440 Terc-201ENSMUST00000082862 423 ntBASIC35.53■■■■□ 3.28
Abca8bQ8K440 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Abca8bQ8K440 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC35.52■■■■□ 3.28
Abca8bQ8K440 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
Abca8bQ8K440 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
Abca8bQ8K440 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC35.51■■■■□ 3.28
Abca8bQ8K440 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC35.51■■■■□ 3.28
Abca8bQ8K440 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Abca8bQ8K440 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
Abca8bQ8K440 Gm14121-201ENSMUST00000121441 1380 ntBASIC35.49■■■■□ 3.27
Abca8bQ8K440 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC35.48■■■■□ 3.27
Abca8bQ8K440 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Abca8bQ8K440 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
Abca8bQ8K440 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
Abca8bQ8K440 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC35.46■■■■□ 3.27
Abca8bQ8K440 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
Abca8bQ8K440 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Abca8bQ8K440 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC35.45■■■■□ 3.27
Abca8bQ8K440 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC35.45■■■■□ 3.27
Abca8bQ8K440 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Abca8bQ8K440 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
Abca8bQ8K440 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
Abca8bQ8K440 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Abca8bQ8K440 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Abca8bQ8K440 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC35.43■■■■□ 3.26
Abca8bQ8K440 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Abca8bQ8K440 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Abca8bQ8K440 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC35.41■■■■□ 3.26
Abca8bQ8K440 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC35.41■■■■□ 3.26
Abca8bQ8K440 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Abca8bQ8K440 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Abca8bQ8K440 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC35.4■■■■□ 3.26
Abca8bQ8K440 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
Abca8bQ8K440 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
Abca8bQ8K440 Gm43566-201ENSMUST00000196851 808 ntBASIC35.39■■■■□ 3.26
Abca8bQ8K440 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Abca8bQ8K440 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Abca8bQ8K440 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
Abca8bQ8K440 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Abca8bQ8K440 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Abca8bQ8K440 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Abca8bQ8K440 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Abca8bQ8K440 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC35.37■■■■□ 3.25
Abca8bQ8K440 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC35.37■■■■□ 3.25
Abca8bQ8K440 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Abca8bQ8K440 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC35.37■■■■□ 3.25
Abca8bQ8K440 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC35.37■■■■□ 3.25
Abca8bQ8K440 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC35.36■■■■□ 3.25
Abca8bQ8K440 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC35.36■■■■□ 3.25
Abca8bQ8K440 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC35.36■■■■□ 3.25
Abca8bQ8K440 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Abca8bQ8K440 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
Abca8bQ8K440 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Abca8bQ8K440 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Abca8bQ8K440 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Abca8bQ8K440 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Abca8bQ8K440 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC35.32■■■■□ 3.25
Abca8bQ8K440 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Abca8bQ8K440 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Abca8bQ8K440 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Abca8bQ8K440 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
Abca8bQ8K440 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC35.3■■■■□ 3.24
Abca8bQ8K440 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Abca8bQ8K440 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC35.3■■■■□ 3.24
Abca8bQ8K440 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
Abca8bQ8K440 Gm13238-201ENSMUST00000117655 780 ntBASIC35.29■■■■□ 3.24
Abca8bQ8K440 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC35.29■■■■□ 3.24
Abca8bQ8K440 AC093043.1-201ENSMUST00000226700 898 ntBASIC35.28■■■■□ 3.24
Abca8bQ8K440 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Abca8bQ8K440 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC35.28■■■■□ 3.24
Abca8bQ8K440 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
Abca8bQ8K440 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC35.28■■■■□ 3.24
Abca8bQ8K440 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC35.28■■■■□ 3.24
Abca8bQ8K440 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Abca8bQ8K440 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC35.25■■■■□ 3.23
Abca8bQ8K440 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Abca8bQ8K440 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Abca8bQ8K440 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC35.23■■■■□ 3.23
Abca8bQ8K440 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Abca8bQ8K440 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC35.22■■■■□ 3.23
Abca8bQ8K440 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Abca8bQ8K440 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Abca8bQ8K440 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Abca8bQ8K440 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
Abca8bQ8K440 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC35.21■■■■□ 3.23
Abca8bQ8K440 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC35.2■■■■□ 3.23
Abca8bQ8K440 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
Abca8bQ8K440 Gm44428-201ENSMUST00000204474 874 ntBASIC35.19■■■■□ 3.22
Abca8bQ8K440 Gm45444-201ENSMUST00000211394 898 ntBASIC35.19■■■■□ 3.22
Abca8bQ8K440 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
Abca8bQ8K440 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC35.17■■■■□ 3.22
Abca8bQ8K440 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
Abca8bQ8K440 Gm15820-201ENSMUST00000201566 728 ntBASIC35.17■■■■□ 3.22
Abca8bQ8K440 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC35.16■■■■□ 3.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms