Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vrk3Q8K3G5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk3Q8K3G5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk3Q8K3G5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vrk3Q8K3G5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vrk3Q8K3G5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.33■□□□□ 0.69
Vrk3Q8K3G5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vrk3Q8K3G5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vrk3Q8K3G5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vrk3Q8K3G5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vrk3Q8K3G5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Vrk3Q8K3G5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk3Q8K3G5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk3Q8K3G5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 Gm6821-201ENSMUST00000107540 542 ntBASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vrk3Q8K3G5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vrk3Q8K3G5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vrk3Q8K3G5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vrk3Q8K3G5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk3Q8K3G5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk3Q8K3G5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk3Q8K3G5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk3Q8K3G5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk3Q8K3G5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vrk3Q8K3G5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vrk3Q8K3G5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vrk3Q8K3G5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.28■□□□□ 0.68
Vrk3Q8K3G5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vrk3Q8K3G5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk3Q8K3G5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk3Q8K3G5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk3Q8K3G5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk3Q8K3G5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vrk3Q8K3G5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Vrk3Q8K3G5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk3Q8K3G5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.26■□□□□ 0.67
Vrk3Q8K3G5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vrk3Q8K3G5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk3Q8K3G5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.25■□□□□ 0.67
Vrk3Q8K3G5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk3Q8K3G5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vrk3Q8K3G5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.24■□□□□ 0.67
Vrk3Q8K3G5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Vrk3Q8K3G5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.24■□□□□ 0.67
Vrk3Q8K3G5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.24■□□□□ 0.67
Vrk3Q8K3G5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Vrk3Q8K3G5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vrk3Q8K3G5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Vrk3Q8K3G5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.21■□□□□ 0.67
Vrk3Q8K3G5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vrk3Q8K3G5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk3Q8K3G5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk3Q8K3G5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.2■□□□□ 0.66
Vrk3Q8K3G5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk3Q8K3G5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk3Q8K3G5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vrk3Q8K3G5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk3Q8K3G5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk3Q8K3G5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk3Q8K3G5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk3Q8K3G5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vrk3Q8K3G5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vrk3Q8K3G5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk3Q8K3G5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vrk3Q8K3G5 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.17■□□□□ 0.66
Vrk3Q8K3G5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk3Q8K3G5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk3Q8K3G5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk3Q8K3G5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vrk3Q8K3G5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk3Q8K3G5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vrk3Q8K3G5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vrk3Q8K3G5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vrk3Q8K3G5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Vrk3Q8K3G5 Gm8503-201ENSMUST00000118131 455 ntBASIC19.13■□□□□ 0.65
Vrk3Q8K3G5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vrk3Q8K3G5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vrk3Q8K3G5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vrk3Q8K3G5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vrk3Q8K3G5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms