Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.54■■□□□ 1.36
Trpm6Q8CIR4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trpm6Q8CIR4 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.53■■□□□ 1.36
Trpm6Q8CIR4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trpm6Q8CIR4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trpm6Q8CIR4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trpm6Q8CIR4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Trpm6Q8CIR4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trpm6Q8CIR4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trpm6Q8CIR4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trpm6Q8CIR4 Gm14523-201ENSMUST00000117260 558 ntBASIC23.51■■□□□ 1.35
Trpm6Q8CIR4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trpm6Q8CIR4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trpm6Q8CIR4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trpm6Q8CIR4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trpm6Q8CIR4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trpm6Q8CIR4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trpm6Q8CIR4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trpm6Q8CIR4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.5■■□□□ 1.35
Trpm6Q8CIR4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trpm6Q8CIR4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trpm6Q8CIR4 Terc-201ENSMUST00000082862 423 ntBASIC23.49■■□□□ 1.35
Trpm6Q8CIR4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.49■■□□□ 1.35
Trpm6Q8CIR4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trpm6Q8CIR4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Trpm6Q8CIR4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.46■■□□□ 1.35
Trpm6Q8CIR4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Trpm6Q8CIR4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trpm6Q8CIR4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.45■■□□□ 1.34
Trpm6Q8CIR4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.45■■□□□ 1.34
Trpm6Q8CIR4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trpm6Q8CIR4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trpm6Q8CIR4 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.44■■□□□ 1.34
Trpm6Q8CIR4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trpm6Q8CIR4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trpm6Q8CIR4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Trpm6Q8CIR4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Trpm6Q8CIR4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trpm6Q8CIR4 Gm10420-201ENSMUST00000121713 882 ntBASIC23.42■■□□□ 1.34
Trpm6Q8CIR4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Trpm6Q8CIR4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Trpm6Q8CIR4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trpm6Q8CIR4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trpm6Q8CIR4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.4■■□□□ 1.34
Trpm6Q8CIR4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trpm6Q8CIR4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.4■■□□□ 1.34
Trpm6Q8CIR4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Trpm6Q8CIR4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.4■■□□□ 1.34
Trpm6Q8CIR4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trpm6Q8CIR4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trpm6Q8CIR4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trpm6Q8CIR4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Trpm6Q8CIR4 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.38■■□□□ 1.33
Trpm6Q8CIR4 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.38■■□□□ 1.33
Trpm6Q8CIR4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trpm6Q8CIR4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.38■■□□□ 1.33
Trpm6Q8CIR4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trpm6Q8CIR4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trpm6Q8CIR4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.37■■□□□ 1.33
Trpm6Q8CIR4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.37■■□□□ 1.33
Trpm6Q8CIR4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Trpm6Q8CIR4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trpm6Q8CIR4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.36■■□□□ 1.33
Trpm6Q8CIR4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trpm6Q8CIR4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trpm6Q8CIR4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trpm6Q8CIR4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trpm6Q8CIR4 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.33■■□□□ 1.33
Trpm6Q8CIR4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trpm6Q8CIR4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trpm6Q8CIR4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trpm6Q8CIR4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Trpm6Q8CIR4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trpm6Q8CIR4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
Trpm6Q8CIR4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trpm6Q8CIR4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trpm6Q8CIR4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm6Q8CIR4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm6Q8CIR4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.31■■□□□ 1.32
Trpm6Q8CIR4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm6Q8CIR4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm6Q8CIR4 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.29■■□□□ 1.32
Trpm6Q8CIR4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm6Q8CIR4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm6Q8CIR4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.28■■□□□ 1.32
Trpm6Q8CIR4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trpm6Q8CIR4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trpm6Q8CIR4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm6Q8CIR4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.28■■□□□ 1.32
Trpm6Q8CIR4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm6Q8CIR4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm6Q8CIR4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
Trpm6Q8CIR4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm6Q8CIR4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm6Q8CIR4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm6Q8CIR4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Trpm6Q8CIR4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm6Q8CIR4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.26■■□□□ 1.31
Trpm6Q8CIR4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trpm6Q8CIR4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms