Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist3h2bbQ8CGP0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist3h2bbQ8CGP0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist3h2bbQ8CGP0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist3h2bbQ8CGP0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hist3h2bbQ8CGP0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.67■□□□□ 0.42
Hist3h2bbQ8CGP0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist3h2bbQ8CGP0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist3h2bbQ8CGP0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hist3h2bbQ8CGP0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist3h2bbQ8CGP0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hist3h2bbQ8CGP0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Hist3h2bbQ8CGP0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hist3h2bbQ8CGP0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist3h2bbQ8CGP0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist3h2bbQ8CGP0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist3h2bbQ8CGP0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hist3h2bbQ8CGP0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist3h2bbQ8CGP0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist3h2bbQ8CGP0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist3h2bbQ8CGP0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist3h2bbQ8CGP0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hist3h2bbQ8CGP0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist3h2bbQ8CGP0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.61■□□□□ 0.41
Hist3h2bbQ8CGP0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist3h2bbQ8CGP0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist3h2bbQ8CGP0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Hist3h2bbQ8CGP0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hist3h2bbQ8CGP0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist3h2bbQ8CGP0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Hist3h2bbQ8CGP0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist3h2bbQ8CGP0 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.59■□□□□ 0.41
Hist3h2bbQ8CGP0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist3h2bbQ8CGP0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hist3h2bbQ8CGP0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hist3h2bbQ8CGP0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hist3h2bbQ8CGP0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hist3h2bbQ8CGP0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist3h2bbQ8CGP0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist3h2bbQ8CGP0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist3h2bbQ8CGP0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist3h2bbQ8CGP0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hist3h2bbQ8CGP0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist3h2bbQ8CGP0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist3h2bbQ8CGP0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hist3h2bbQ8CGP0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hist3h2bbQ8CGP0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist3h2bbQ8CGP0 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.55■□□□□ 0.4
Hist3h2bbQ8CGP0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Hist3h2bbQ8CGP0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hist3h2bbQ8CGP0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist3h2bbQ8CGP0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist3h2bbQ8CGP0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist3h2bbQ8CGP0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hist3h2bbQ8CGP0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hist3h2bbQ8CGP0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hist3h2bbQ8CGP0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist3h2bbQ8CGP0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hist3h2bbQ8CGP0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hist3h2bbQ8CGP0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hist3h2bbQ8CGP0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hist3h2bbQ8CGP0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hist3h2bbQ8CGP0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
Hist3h2bbQ8CGP0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hist3h2bbQ8CGP0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist3h2bbQ8CGP0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hist3h2bbQ8CGP0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hist3h2bbQ8CGP0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hist3h2bbQ8CGP0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hist3h2bbQ8CGP0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hist3h2bbQ8CGP0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist3h2bbQ8CGP0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hist3h2bbQ8CGP0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist3h2bbQ8CGP0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.49■□□□□ 0.39
Hist3h2bbQ8CGP0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hist3h2bbQ8CGP0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hist3h2bbQ8CGP0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.48■□□□□ 0.39
Hist3h2bbQ8CGP0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hist3h2bbQ8CGP0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hist3h2bbQ8CGP0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.48■□□□□ 0.39
Hist3h2bbQ8CGP0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hist3h2bbQ8CGP0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hist3h2bbQ8CGP0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hist3h2bbQ8CGP0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hist3h2bbQ8CGP0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hist3h2bbQ8CGP0 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms