Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Smc2Q8CG48 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Smc2Q8CG48 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Smc2Q8CG48 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smc2Q8CG48 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smc2Q8CG48 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc2Q8CG48 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc2Q8CG48 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc2Q8CG48 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc2Q8CG48 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc2Q8CG48 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Smc2Q8CG48 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smc2Q8CG48 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc2Q8CG48 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smc2Q8CG48 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc2Q8CG48 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.16■■□□□ 1.78
Smc2Q8CG48 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc2Q8CG48 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.15■■□□□ 1.78
Smc2Q8CG48 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Smc2Q8CG48 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc2Q8CG48 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.15■■□□□ 1.78
Smc2Q8CG48 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc2Q8CG48 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Smc2Q8CG48 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
Smc2Q8CG48 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Smc2Q8CG48 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.13■■□□□ 1.77
Smc2Q8CG48 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc2Q8CG48 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc2Q8CG48 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc2Q8CG48 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc2Q8CG48 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.11■■□□□ 1.77
Smc2Q8CG48 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.11■■□□□ 1.77
Smc2Q8CG48 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Smc2Q8CG48 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Smc2Q8CG48 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Smc2Q8CG48 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc2Q8CG48 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc2Q8CG48 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.09■■□□□ 1.77
Smc2Q8CG48 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.09■■□□□ 1.77
Smc2Q8CG48 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc2Q8CG48 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc2Q8CG48 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Smc2Q8CG48 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Smc2Q8CG48 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.76
Smc2Q8CG48 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc2Q8CG48 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Smc2Q8CG48 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.06■■□□□ 1.76
Smc2Q8CG48 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.06■■□□□ 1.76
Smc2Q8CG48 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc2Q8CG48 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc2Q8CG48 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc2Q8CG48 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc2Q8CG48 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Smc2Q8CG48 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc2Q8CG48 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Smc2Q8CG48 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smc2Q8CG48 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Smc2Q8CG48 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Smc2Q8CG48 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Smc2Q8CG48 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Smc2Q8CG48 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smc2Q8CG48 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Smc2Q8CG48 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Smc2Q8CG48 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.01■■□□□ 1.75
Smc2Q8CG48 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Smc2Q8CG48 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Smc2Q8CG48 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Smc2Q8CG48 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Smc2Q8CG48 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smc2Q8CG48 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smc2Q8CG48 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Smc2Q8CG48 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smc2Q8CG48 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Smc2Q8CG48 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smc2Q8CG48 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Smc2Q8CG48 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc2Q8CG48 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.97■■□□□ 1.75
Smc2Q8CG48 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc2Q8CG48 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smc2Q8CG48 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Smc2Q8CG48 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Smc2Q8CG48 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Smc2Q8CG48 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smc2Q8CG48 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Smc2Q8CG48 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smc2Q8CG48 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Smc2Q8CG48 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smc2Q8CG48 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.94■■□□□ 1.74
Smc2Q8CG48 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc2Q8CG48 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc2Q8CG48 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc2Q8CG48 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smc2Q8CG48 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Smc2Q8CG48 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc2Q8CG48 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc2Q8CG48 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smc2Q8CG48 Gm7432-201ENSMUST00000210343 879 ntBASIC25.92■■□□□ 1.74
Smc2Q8CG48 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.92■■□□□ 1.74
Smc2Q8CG48 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smc2Q8CG48 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms