Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Smc5Q8CG46 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Smc5Q8CG46 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Smc5Q8CG46 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Smc5Q8CG46 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Smc5Q8CG46 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.68■■■□□ 2.18
Smc5Q8CG46 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
Smc5Q8CG46 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Smc5Q8CG46 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Smc5Q8CG46 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Smc5Q8CG46 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Smc5Q8CG46 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Smc5Q8CG46 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Smc5Q8CG46 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Smc5Q8CG46 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Smc5Q8CG46 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
Smc5Q8CG46 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
Smc5Q8CG46 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Smc5Q8CG46 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Smc5Q8CG46 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Smc5Q8CG46 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Smc5Q8CG46 H3f3aos-201ENSMUST00000097448 2905 ntBASIC28.63■■■□□ 2.17
Smc5Q8CG46 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Smc5Q8CG46 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Smc5Q8CG46 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Smc5Q8CG46 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Smc5Q8CG46 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Smc5Q8CG46 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Smc5Q8CG46 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Smc5Q8CG46 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Smc5Q8CG46 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Smc5Q8CG46 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.59■■■□□ 2.17
Smc5Q8CG46 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc5Q8CG46 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc5Q8CG46 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc5Q8CG46 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc5Q8CG46 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC28.58■■■□□ 2.16
Smc5Q8CG46 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC28.57■■■□□ 2.16
Smc5Q8CG46 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Smc5Q8CG46 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Smc5Q8CG46 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Smc5Q8CG46 Gm17641-201ENSMUST00000166328 2350 ntBASIC28.57■■■□□ 2.16
Smc5Q8CG46 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Smc5Q8CG46 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Smc5Q8CG46 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Smc5Q8CG46 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Smc5Q8CG46 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
Smc5Q8CG46 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Smc5Q8CG46 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.54■■■□□ 2.16
Smc5Q8CG46 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Smc5Q8CG46 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Smc5Q8CG46 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Smc5Q8CG46 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Smc5Q8CG46 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Smc5Q8CG46 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC28.51■■■□□ 2.16
Smc5Q8CG46 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Smc5Q8CG46 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC28.51■■■□□ 2.15
Smc5Q8CG46 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.5■■■□□ 2.15
Smc5Q8CG46 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Smc5Q8CG46 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Smc5Q8CG46 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Smc5Q8CG46 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Smc5Q8CG46 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Smc5Q8CG46 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Smc5Q8CG46 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc5Q8CG46 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc5Q8CG46 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc5Q8CG46 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc5Q8CG46 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Smc5Q8CG46 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Smc5Q8CG46 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Smc5Q8CG46 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Smc5Q8CG46 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC28.45■■■□□ 2.15
Smc5Q8CG46 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Smc5Q8CG46 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
Smc5Q8CG46 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Smc5Q8CG46 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Smc5Q8CG46 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
Smc5Q8CG46 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Smc5Q8CG46 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Smc5Q8CG46 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Smc5Q8CG46 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Smc5Q8CG46 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Smc5Q8CG46 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Smc5Q8CG46 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.41■■■□□ 2.14
Smc5Q8CG46 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Smc5Q8CG46 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Smc5Q8CG46 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Smc5Q8CG46 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC28.4■■■□□ 2.14
Smc5Q8CG46 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Smc5Q8CG46 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Smc5Q8CG46 Gm37136-201ENSMUST00000194368 194 ntBASIC28.39■■■□□ 2.14
Smc5Q8CG46 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.39■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms