Protein–RNA interactions for Protein: Q8BGR1

Pdzph1, MCG20355, mousemouse

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzph1Q8BGR1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Pdzph1Q8BGR1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pdzph1Q8BGR1 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.42■■■□□ 2.14
Pdzph1Q8BGR1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pdzph1Q8BGR1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28.41■■■□□ 2.14
Pdzph1Q8BGR1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.41■■■□□ 2.14
Pdzph1Q8BGR1 Terc-201ENSMUST00000082862 423 ntBASIC28.41■■■□□ 2.14
Pdzph1Q8BGR1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Pdzph1Q8BGR1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
Pdzph1Q8BGR1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
Pdzph1Q8BGR1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Pdzph1Q8BGR1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pdzph1Q8BGR1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC28.38■■■□□ 2.13
Pdzph1Q8BGR1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Pdzph1Q8BGR1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pdzph1Q8BGR1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pdzph1Q8BGR1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.38■■■□□ 2.13
Pdzph1Q8BGR1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Pdzph1Q8BGR1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.37■■■□□ 2.13
Pdzph1Q8BGR1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.37■■■□□ 2.13
Pdzph1Q8BGR1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pdzph1Q8BGR1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pdzph1Q8BGR1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pdzph1Q8BGR1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC28.35■■■□□ 2.13
Pdzph1Q8BGR1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pdzph1Q8BGR1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Pdzph1Q8BGR1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pdzph1Q8BGR1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.33■■■□□ 2.13
Pdzph1Q8BGR1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pdzph1Q8BGR1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pdzph1Q8BGR1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pdzph1Q8BGR1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Pdzph1Q8BGR1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.32■■■□□ 2.12
Pdzph1Q8BGR1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.31■■■□□ 2.12
Pdzph1Q8BGR1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Pdzph1Q8BGR1 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.31■■■□□ 2.12
Pdzph1Q8BGR1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pdzph1Q8BGR1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Pdzph1Q8BGR1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pdzph1Q8BGR1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pdzph1Q8BGR1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
Pdzph1Q8BGR1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Pdzph1Q8BGR1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Pdzph1Q8BGR1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pdzph1Q8BGR1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.28■■■□□ 2.12
Pdzph1Q8BGR1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pdzph1Q8BGR1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pdzph1Q8BGR1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pdzph1Q8BGR1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pdzph1Q8BGR1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.27■■■□□ 2.12
Pdzph1Q8BGR1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pdzph1Q8BGR1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Pdzph1Q8BGR1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Pdzph1Q8BGR1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pdzph1Q8BGR1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Pdzph1Q8BGR1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pdzph1Q8BGR1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Pdzph1Q8BGR1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Pdzph1Q8BGR1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pdzph1Q8BGR1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.22■■■□□ 2.11
Pdzph1Q8BGR1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Pdzph1Q8BGR1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.22■■■□□ 2.11
Pdzph1Q8BGR1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Pdzph1Q8BGR1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.22■■■□□ 2.11
Pdzph1Q8BGR1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pdzph1Q8BGR1 Rps24-207ENSMUST00000224568 714 ntBASIC28.21■■■□□ 2.11
Pdzph1Q8BGR1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pdzph1Q8BGR1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.2■■■□□ 2.1
Pdzph1Q8BGR1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pdzph1Q8BGR1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Pdzph1Q8BGR1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pdzph1Q8BGR1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pdzph1Q8BGR1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pdzph1Q8BGR1 Gm15820-201ENSMUST00000201566 728 ntBASIC28.18■■■□□ 2.1
Pdzph1Q8BGR1 Gm44428-201ENSMUST00000204474 874 ntBASIC28.18■■■□□ 2.1
Pdzph1Q8BGR1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pdzph1Q8BGR1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.17■■■□□ 2.1
Pdzph1Q8BGR1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pdzph1Q8BGR1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pdzph1Q8BGR1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pdzph1Q8BGR1 Gm13238-201ENSMUST00000117655 780 ntBASIC28.16■■■□□ 2.1
Pdzph1Q8BGR1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Pdzph1Q8BGR1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pdzph1Q8BGR1 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.14■■■□□ 2.1
Pdzph1Q8BGR1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pdzph1Q8BGR1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pdzph1Q8BGR1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.14■■■□□ 2.09
Pdzph1Q8BGR1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pdzph1Q8BGR1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Pdzph1Q8BGR1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pdzph1Q8BGR1 Gm43566-201ENSMUST00000196851 808 ntBASIC28.12■■■□□ 2.09
Pdzph1Q8BGR1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pdzph1Q8BGR1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
Pdzph1Q8BGR1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pdzph1Q8BGR1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pdzph1Q8BGR1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.11■■■□□ 2.09
Pdzph1Q8BGR1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Pdzph1Q8BGR1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Pdzph1Q8BGR1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pdzph1Q8BGR1 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.1■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms