Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Tnrc18Q80WC3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tnrc18Q80WC3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Tnrc18Q80WC3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tnrc18Q80WC3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Tnrc18Q80WC3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tnrc18Q80WC3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.89■■□□□ 1.41
Tnrc18Q80WC3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Tnrc18Q80WC3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tnrc18Q80WC3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Tnrc18Q80WC3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Tnrc18Q80WC3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tnrc18Q80WC3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tnrc18Q80WC3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tnrc18Q80WC3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Tnrc18Q80WC3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Tnrc18Q80WC3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tnrc18Q80WC3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tnrc18Q80WC3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Tnrc18Q80WC3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.83■■□□□ 1.41
Tnrc18Q80WC3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tnrc18Q80WC3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tnrc18Q80WC3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Tnrc18Q80WC3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.81■■□□□ 1.4
Tnrc18Q80WC3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tnrc18Q80WC3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Tnrc18Q80WC3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.81■■□□□ 1.4
Tnrc18Q80WC3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Tnrc18Q80WC3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tnrc18Q80WC3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tnrc18Q80WC3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tnrc18Q80WC3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tnrc18Q80WC3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tnrc18Q80WC3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tnrc18Q80WC3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.78■■□□□ 1.4
Tnrc18Q80WC3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Tnrc18Q80WC3 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.77■■□□□ 1.4
Tnrc18Q80WC3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tnrc18Q80WC3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Tnrc18Q80WC3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.76■■□□□ 1.39
Tnrc18Q80WC3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
Tnrc18Q80WC3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tnrc18Q80WC3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tnrc18Q80WC3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.75■■□□□ 1.39
Tnrc18Q80WC3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tnrc18Q80WC3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tnrc18Q80WC3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tnrc18Q80WC3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.74■■□□□ 1.39
Tnrc18Q80WC3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tnrc18Q80WC3 Gm45102-201ENSMUST00000207427 857 ntBASIC23.74■■□□□ 1.39
Tnrc18Q80WC3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Tnrc18Q80WC3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tnrc18Q80WC3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tnrc18Q80WC3 Rps24-207ENSMUST00000224568 714 ntBASIC23.7■■□□□ 1.39
Tnrc18Q80WC3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Tnrc18Q80WC3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tnrc18Q80WC3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tnrc18Q80WC3 Gm43566-201ENSMUST00000196851 808 ntBASIC23.7■■□□□ 1.38
Tnrc18Q80WC3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tnrc18Q80WC3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Tnrc18Q80WC3 Gm13238-201ENSMUST00000117655 780 ntBASIC23.69■■□□□ 1.38
Tnrc18Q80WC3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tnrc18Q80WC3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Tnrc18Q80WC3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.69■■□□□ 1.38
Tnrc18Q80WC3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Tnrc18Q80WC3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tnrc18Q80WC3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tnrc18Q80WC3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tnrc18Q80WC3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tnrc18Q80WC3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.66■■□□□ 1.38
Tnrc18Q80WC3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
Tnrc18Q80WC3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tnrc18Q80WC3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.66■■□□□ 1.38
Tnrc18Q80WC3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tnrc18Q80WC3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.65■■□□□ 1.38
Tnrc18Q80WC3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Tnrc18Q80WC3 Gm14117-201ENSMUST00000122417 843 ntBASIC23.65■■□□□ 1.38
Tnrc18Q80WC3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tnrc18Q80WC3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tnrc18Q80WC3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tnrc18Q80WC3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tnrc18Q80WC3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.63■■□□□ 1.37
Tnrc18Q80WC3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Tnrc18Q80WC3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Tnrc18Q80WC3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tnrc18Q80WC3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tnrc18Q80WC3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tnrc18Q80WC3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tnrc18Q80WC3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Tnrc18Q80WC3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tnrc18Q80WC3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tnrc18Q80WC3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Tnrc18Q80WC3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.61■■□□□ 1.37
Tnrc18Q80WC3 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.61■■□□□ 1.37
Tnrc18Q80WC3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.61■■□□□ 1.37
Tnrc18Q80WC3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tnrc18Q80WC3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.6■■□□□ 1.37
Tnrc18Q80WC3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tnrc18Q80WC3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Tnrc18Q80WC3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms