Protein–RNA interactions for Protein: Q6PDK8

Dtx4, E3 ubiquitin-protein ligase DTX4, mousemouse

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dtx4Q6PDK8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dtx4Q6PDK8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dtx4Q6PDK8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.13■□□□□ 0.97
Dtx4Q6PDK8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dtx4Q6PDK8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dtx4Q6PDK8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dtx4Q6PDK8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Dtx4Q6PDK8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dtx4Q6PDK8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dtx4Q6PDK8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.11■□□□□ 0.97
Dtx4Q6PDK8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.11■□□□□ 0.97
Dtx4Q6PDK8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dtx4Q6PDK8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dtx4Q6PDK8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dtx4Q6PDK8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Dtx4Q6PDK8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dtx4Q6PDK8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dtx4Q6PDK8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dtx4Q6PDK8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Dtx4Q6PDK8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dtx4Q6PDK8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Dtx4Q6PDK8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Dtx4Q6PDK8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Dtx4Q6PDK8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Dtx4Q6PDK8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dtx4Q6PDK8 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.07■□□□□ 0.96
Dtx4Q6PDK8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Dtx4Q6PDK8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Dtx4Q6PDK8 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.07■□□□□ 0.96
Dtx4Q6PDK8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Dtx4Q6PDK8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Dtx4Q6PDK8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.06■□□□□ 0.96
Dtx4Q6PDK8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Dtx4Q6PDK8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.05■□□□□ 0.96
Dtx4Q6PDK8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Gm8503-201ENSMUST00000118131 455 ntBASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Dtx4Q6PDK8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Dtx4Q6PDK8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.03■□□□□ 0.96
Dtx4Q6PDK8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dtx4Q6PDK8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dtx4Q6PDK8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.02■□□□□ 0.96
Dtx4Q6PDK8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.01■□□□□ 0.95
Dtx4Q6PDK8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Dtx4Q6PDK8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Dtx4Q6PDK8 Gm6821-201ENSMUST00000107540 542 ntBASIC21.01■□□□□ 0.95
Dtx4Q6PDK8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.01■□□□□ 0.95
Dtx4Q6PDK8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dtx4Q6PDK8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Dtx4Q6PDK8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Dtx4Q6PDK8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Dtx4Q6PDK8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Dtx4Q6PDK8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Dtx4Q6PDK8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21■□□□□ 0.95
Dtx4Q6PDK8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21■□□□□ 0.95
Dtx4Q6PDK8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Dtx4Q6PDK8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.99■□□□□ 0.95
Dtx4Q6PDK8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Dtx4Q6PDK8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Dtx4Q6PDK8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.99■□□□□ 0.95
Dtx4Q6PDK8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Dtx4Q6PDK8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Dtx4Q6PDK8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Dtx4Q6PDK8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.98■□□□□ 0.95
Dtx4Q6PDK8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Dtx4Q6PDK8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Dtx4Q6PDK8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.97■□□□□ 0.95
Dtx4Q6PDK8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.97■□□□□ 0.95
Dtx4Q6PDK8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Dtx4Q6PDK8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Dtx4Q6PDK8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Dtx4Q6PDK8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Dtx4Q6PDK8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Dtx4Q6PDK8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Dtx4Q6PDK8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Dtx4Q6PDK8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Dtx4Q6PDK8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Dtx4Q6PDK8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dtx4Q6PDK8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dtx4Q6PDK8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dtx4Q6PDK8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Dtx4Q6PDK8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dtx4Q6PDK8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dtx4Q6PDK8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Dtx4Q6PDK8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dtx4Q6PDK8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Dtx4Q6PDK8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.92■□□□□ 0.94
Dtx4Q6PDK8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.92■□□□□ 0.94
Dtx4Q6PDK8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Dtx4Q6PDK8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dtx4Q6PDK8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dtx4Q6PDK8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dtx4Q6PDK8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Dtx4Q6PDK8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms