Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zfp248Q640N4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zfp248Q640N4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zfp248Q640N4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.38■□□□□ 0.37
Zfp248Q640N4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Zfp248Q640N4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Zfp248Q640N4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zfp248Q640N4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.36■□□□□ 0.37
Zfp248Q640N4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zfp248Q640N4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zfp248Q640N4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zfp248Q640N4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zfp248Q640N4 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.35■□□□□ 0.37
Zfp248Q640N4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zfp248Q640N4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zfp248Q640N4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zfp248Q640N4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zfp248Q640N4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zfp248Q640N4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zfp248Q640N4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zfp248Q640N4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zfp248Q640N4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zfp248Q640N4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zfp248Q640N4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zfp248Q640N4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.32■□□□□ 0.36
Zfp248Q640N4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zfp248Q640N4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.32■□□□□ 0.36
Zfp248Q640N4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.31■□□□□ 0.36
Zfp248Q640N4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp248Q640N4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp248Q640N4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.3■□□□□ 0.36
Zfp248Q640N4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.29■□□□□ 0.36
Zfp248Q640N4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp248Q640N4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Zfp248Q640N4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp248Q640N4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp248Q640N4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp248Q640N4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp248Q640N4 Gm6821-201ENSMUST00000107540 542 ntBASIC17.28■□□□□ 0.36
Zfp248Q640N4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.28■□□□□ 0.36
Zfp248Q640N4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp248Q640N4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.27■□□□□ 0.36
Zfp248Q640N4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp248Q640N4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp248Q640N4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp248Q640N4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp248Q640N4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Zfp248Q640N4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Zfp248Q640N4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp248Q640N4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp248Q640N4 Gm37136-201ENSMUST00000194368 194 ntBASIC17.25■□□□□ 0.35
Zfp248Q640N4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zfp248Q640N4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Zfp248Q640N4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp248Q640N4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp248Q640N4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp248Q640N4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp248Q640N4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp248Q640N4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.24■□□□□ 0.35
Zfp248Q640N4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Zfp248Q640N4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp248Q640N4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zfp248Q640N4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp248Q640N4 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.23■□□□□ 0.35
Zfp248Q640N4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zfp248Q640N4 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.23■□□□□ 0.35
Zfp248Q640N4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp248Q640N4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Zfp248Q640N4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp248Q640N4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Zfp248Q640N4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Zfp248Q640N4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Zfp248Q640N4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp248Q640N4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zfp248Q640N4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.2■□□□□ 0.34
Zfp248Q640N4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms