Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.96■■□□□ 1.11
CishQ62225 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CishQ62225 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CishQ62225 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.96■■□□□ 1.11
CishQ62225 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CishQ62225 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CishQ62225 Gm45364-201ENSMUST00000210883 159 ntBASIC21.95■■□□□ 1.1
CishQ62225 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CishQ62225 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.94■■□□□ 1.1
CishQ62225 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CishQ62225 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CishQ62225 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CishQ62225 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
CishQ62225 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CishQ62225 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CishQ62225 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CishQ62225 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.92■■□□□ 1.1
CishQ62225 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CishQ62225 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CishQ62225 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CishQ62225 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.91■■□□□ 1.1
CishQ62225 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CishQ62225 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CishQ62225 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CishQ62225 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CishQ62225 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CishQ62225 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.89■■□□□ 1.09
CishQ62225 Gm9812-201ENSMUST00000061934 968 ntBASIC21.89■■□□□ 1.09
CishQ62225 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CishQ62225 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
CishQ62225 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CishQ62225 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CishQ62225 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CishQ62225 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CishQ62225 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
CishQ62225 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CishQ62225 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CishQ62225 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CishQ62225 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CishQ62225 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CishQ62225 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CishQ62225 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CishQ62225 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.85■■□□□ 1.09
CishQ62225 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.85■■□□□ 1.09
CishQ62225 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CishQ62225 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CishQ62225 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CishQ62225 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.84■■□□□ 1.09
CishQ62225 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.84■■□□□ 1.09
CishQ62225 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CishQ62225 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CishQ62225 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CishQ62225 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.82■■□□□ 1.08
CishQ62225 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CishQ62225 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CishQ62225 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CishQ62225 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CishQ62225 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CishQ62225 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
CishQ62225 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CishQ62225 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CishQ62225 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CishQ62225 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CishQ62225 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CishQ62225 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.8■■□□□ 1.08
CishQ62225 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CishQ62225 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CishQ62225 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CishQ62225 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CishQ62225 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CishQ62225 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.79■■□□□ 1.08
CishQ62225 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CishQ62225 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CishQ62225 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CishQ62225 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CishQ62225 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.78■■□□□ 1.08
CishQ62225 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CishQ62225 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CishQ62225 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CishQ62225 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CishQ62225 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CishQ62225 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CishQ62225 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CishQ62225 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CishQ62225 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CishQ62225 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CishQ62225 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CishQ62225 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CishQ62225 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CishQ62225 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CishQ62225 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CishQ62225 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CishQ62225 Scarna2-201ENSMUST00000157560 414 ntBASIC21.75■■□□□ 1.07
CishQ62225 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CishQ62225 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CishQ62225 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CishQ62225 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CishQ62225 Gm9806-201ENSMUST00000051080 552 ntBASIC21.73■■□□□ 1.07
CishQ62225 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CishQ62225 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms