Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxf1Q61080 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Foxf1Q61080 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Foxf1Q61080 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxf1Q61080 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Foxf1Q61080 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Foxf1Q61080 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxf1Q61080 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf1Q61080 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf1Q61080 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf1Q61080 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf1Q61080 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Foxf1Q61080 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Foxf1Q61080 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Foxf1Q61080 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxf1Q61080 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxf1Q61080 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxf1Q61080 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxf1Q61080 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxf1Q61080 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxf1Q61080 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxf1Q61080 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxf1Q61080 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Foxf1Q61080 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxf1Q61080 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Foxf1Q61080 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Foxf1Q61080 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxf1Q61080 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Foxf1Q61080 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Foxf1Q61080 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.2■□□□□ 0.66
Foxf1Q61080 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Foxf1Q61080 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxf1Q61080 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxf1Q61080 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxf1Q61080 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Foxf1Q61080 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxf1Q61080 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.18■□□□□ 0.66
Foxf1Q61080 Gm37136-201ENSMUST00000194368 194 ntBASIC19.18■□□□□ 0.66
Foxf1Q61080 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.17■□□□□ 0.66
Foxf1Q61080 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Foxf1Q61080 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Foxf1Q61080 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.17■□□□□ 0.66
Foxf1Q61080 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Foxf1Q61080 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxf1Q61080 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxf1Q61080 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.16■□□□□ 0.66
Foxf1Q61080 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
Foxf1Q61080 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.16■□□□□ 0.66
Foxf1Q61080 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxf1Q61080 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.16■□□□□ 0.66
Foxf1Q61080 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Foxf1Q61080 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxf1Q61080 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxf1Q61080 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.15■□□□□ 0.66
Foxf1Q61080 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Foxf1Q61080 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Foxf1Q61080 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Foxf1Q61080 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Foxf1Q61080 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Foxf1Q61080 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Foxf1Q61080 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Foxf1Q61080 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Foxf1Q61080 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Foxf1Q61080 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Foxf1Q61080 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxf1Q61080 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxf1Q61080 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxf1Q61080 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxf1Q61080 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.12■□□□□ 0.65
Foxf1Q61080 Gm7432-201ENSMUST00000210343 879 ntBASIC19.12■□□□□ 0.65
Foxf1Q61080 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxf1Q61080 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Foxf1Q61080 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Foxf1Q61080 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Foxf1Q61080 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Foxf1Q61080 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxf1Q61080 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxf1Q61080 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxf1Q61080 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxf1Q61080 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Foxf1Q61080 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxf1Q61080 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxf1Q61080 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxf1Q61080 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxf1Q61080 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxf1Q61080 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxf1Q61080 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Foxf1Q61080 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Foxf1Q61080 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Foxf1Q61080 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Foxf1Q61080 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Foxf1Q61080 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.07■□□□□ 0.64
Foxf1Q61080 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Foxf1Q61080 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.07■□□□□ 0.64
Foxf1Q61080 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Foxf1Q61080 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Foxf1Q61080 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxf1Q61080 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Foxf1Q61080 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Foxf1Q61080 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms