Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd3Q61060 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.9■□□□□ 0.94
Foxd3Q61060 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxd3Q61060 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Foxd3Q61060 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Foxd3Q61060 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Foxd3Q61060 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Foxd3Q61060 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Foxd3Q61060 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Foxd3Q61060 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd3Q61060 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Foxd3Q61060 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxd3Q61060 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Foxd3Q61060 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Foxd3Q61060 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Foxd3Q61060 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.86■□□□□ 0.93
Foxd3Q61060 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Foxd3Q61060 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Foxd3Q61060 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.85■□□□□ 0.93
Foxd3Q61060 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxd3Q61060 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Foxd3Q61060 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxd3Q61060 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Foxd3Q61060 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Foxd3Q61060 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Foxd3Q61060 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Foxd3Q61060 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Foxd3Q61060 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Foxd3Q61060 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxd3Q61060 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxd3Q61060 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxd3Q61060 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Foxd3Q61060 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxd3Q61060 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxd3Q61060 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxd3Q61060 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxd3Q61060 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxd3Q61060 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxd3Q61060 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd3Q61060 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd3Q61060 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd3Q61060 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxd3Q61060 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Foxd3Q61060 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd3Q61060 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.78■□□□□ 0.92
Foxd3Q61060 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd3Q61060 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd3Q61060 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd3Q61060 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxd3Q61060 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxd3Q61060 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.77■□□□□ 0.92
Foxd3Q61060 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Foxd3Q61060 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.77■□□□□ 0.92
Foxd3Q61060 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.77■□□□□ 0.92
Foxd3Q61060 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Foxd3Q61060 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Foxd3Q61060 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd3Q61060 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd3Q61060 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd3Q61060 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxd3Q61060 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Foxd3Q61060 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd3Q61060 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd3Q61060 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd3Q61060 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxd3Q61060 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Foxd3Q61060 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd3Q61060 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Foxd3Q61060 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd3Q61060 Gm7432-201ENSMUST00000210343 879 ntBASIC20.74■□□□□ 0.91
Foxd3Q61060 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxd3Q61060 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd3Q61060 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.73■□□□□ 0.91
Foxd3Q61060 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd3Q61060 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd3Q61060 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd3Q61060 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Foxd3Q61060 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd3Q61060 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.73■□□□□ 0.91
Foxd3Q61060 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxd3Q61060 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd3Q61060 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Foxd3Q61060 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd3Q61060 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.72■□□□□ 0.91
Foxd3Q61060 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd3Q61060 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Foxd3Q61060 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.71■□□□□ 0.91
Foxd3Q61060 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Foxd3Q61060 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd3Q61060 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.7■□□□□ 0.9
Foxd3Q61060 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.7■□□□□ 0.9
Foxd3Q61060 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Foxd3Q61060 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd3Q61060 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd3Q61060 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd3Q61060 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.69■□□□□ 0.9
Foxd3Q61060 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Foxd3Q61060 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Foxd3Q61060 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.68■□□□□ 0.9
Foxd3Q61060 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms