Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a11P31650 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a11P31650 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.72■■□□□ 1.07
Slc6a11P31650 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a11P31650 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.72■■□□□ 1.07
Slc6a11P31650 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a11P31650 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a11P31650 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a11P31650 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Slc6a11P31650 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.7■■□□□ 1.06
Slc6a11P31650 Gm11599-201ENSMUST00000118720 878 ntBASIC21.7■■□□□ 1.06
Slc6a11P31650 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a11P31650 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a11P31650 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a11P31650 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a11P31650 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a11P31650 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a11P31650 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Slc6a11P31650 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a11P31650 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a11P31650 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a11P31650 Particl-201ENSMUST00000205370 1560 ntBASIC21.67■■□□□ 1.06
Slc6a11P31650 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Slc6a11P31650 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a11P31650 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a11P31650 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a11P31650 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a11P31650 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a11P31650 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a11P31650 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a11P31650 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a11P31650 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Slc6a11P31650 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a11P31650 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Slc6a11P31650 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Slc6a11P31650 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a11P31650 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a11P31650 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a11P31650 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Slc6a11P31650 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.63■■□□□ 1.05
Slc6a11P31650 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc6a11P31650 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a11P31650 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a11P31650 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a11P31650 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
Slc6a11P31650 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a11P31650 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a11P31650 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.61■■□□□ 1.05
Slc6a11P31650 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a11P31650 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc6a11P31650 Mir6538-201ENSMUST00000183713 110 ntBASIC21.6■■□□□ 1.05
Slc6a11P31650 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a11P31650 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.59■■□□□ 1.05
Slc6a11P31650 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.59■■□□□ 1.05
Slc6a11P31650 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a11P31650 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc6a11P31650 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc6a11P31650 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc6a11P31650 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Slc6a11P31650 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc6a11P31650 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a11P31650 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a11P31650 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a11P31650 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.56■■□□□ 1.04
Slc6a11P31650 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a11P31650 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a11P31650 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a11P31650 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a11P31650 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a11P31650 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a11P31650 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a11P31650 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Slc6a11P31650 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a11P31650 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a11P31650 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Slc6a11P31650 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a11P31650 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Slc6a11P31650 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a11P31650 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a11P31650 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a11P31650 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a11P31650 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.51■■□□□ 1.03
Slc6a11P31650 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.51■■□□□ 1.03
Slc6a11P31650 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc6a11P31650 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc6a11P31650 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Slc6a11P31650 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Slc6a11P31650 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a11P31650 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a11P31650 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a11P31650 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc6a11P31650 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a11P31650 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a11P31650 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc6a11P31650 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.48■■□□□ 1.03
Slc6a11P31650 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Slc6a11P31650 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc6a11P31650 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Slc6a11P31650 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc6a11P31650 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms