Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.26■□□□□ 0.99
Tnfrsf1bP25119 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf1bP25119 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf1bP25119 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.26■□□□□ 0.99
Tnfrsf1bP25119 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf1bP25119 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf1bP25119 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf1bP25119 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf1bP25119 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf1bP25119 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tnfrsf1bP25119 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Tnfrsf1bP25119 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf1bP25119 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf1bP25119 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf1bP25119 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.24■□□□□ 0.99
Tnfrsf1bP25119 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.23■□□□□ 0.99
Tnfrsf1bP25119 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf1bP25119 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.23■□□□□ 0.99
Tnfrsf1bP25119 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf1bP25119 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf1bP25119 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.22■□□□□ 0.99
Tnfrsf1bP25119 Gm45364-201ENSMUST00000210883 159 ntBASIC21.22■□□□□ 0.99
Tnfrsf1bP25119 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf1bP25119 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.21■□□□□ 0.99
Tnfrsf1bP25119 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Tnfrsf1bP25119 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf1bP25119 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.21■□□□□ 0.99
Tnfrsf1bP25119 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf1bP25119 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf1bP25119 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Tnfrsf1bP25119 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.19■□□□□ 0.98
Tnfrsf1bP25119 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Tnfrsf1bP25119 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tnfrsf1bP25119 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.18■□□□□ 0.98
Tnfrsf1bP25119 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf1bP25119 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.17■□□□□ 0.98
Tnfrsf1bP25119 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf1bP25119 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf1bP25119 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf1bP25119 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Tnfrsf1bP25119 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Tnfrsf1bP25119 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf1bP25119 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf1bP25119 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf1bP25119 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf1bP25119 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf1bP25119 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf1bP25119 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf1bP25119 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tnfrsf1bP25119 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.14■□□□□ 0.97
Tnfrsf1bP25119 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf1bP25119 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf1bP25119 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf1bP25119 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.13■□□□□ 0.97
Tnfrsf1bP25119 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf1bP25119 Gm9812-201ENSMUST00000061934 968 ntBASIC21.12■□□□□ 0.97
Tnfrsf1bP25119 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf1bP25119 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf1bP25119 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf1bP25119 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf1bP25119 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf1bP25119 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf1bP25119 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf1bP25119 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf1bP25119 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf1bP25119 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf1bP25119 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Tnfrsf1bP25119 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.08■□□□□ 0.97
Tnfrsf1bP25119 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf1bP25119 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf1bP25119 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf1bP25119 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf1bP25119 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf1bP25119 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf1bP25119 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tnfrsf1bP25119 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf1bP25119 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Tnfrsf1bP25119 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf1bP25119 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf1bP25119 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf1bP25119 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnfrsf1bP25119 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf1bP25119 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Scarna2-201ENSMUST00000157560 414 ntBASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf1bP25119 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms