Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn1P18608 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgn1P18608 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmgn1P18608 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn1P18608 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn1P18608 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.01■□□□□ 0.95
Hmgn1P18608 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hmgn1P18608 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Hmgn1P18608 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgn1P18608 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn1P18608 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21■□□□□ 0.95
Hmgn1P18608 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn1P18608 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21■□□□□ 0.95
Hmgn1P18608 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn1P18608 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgn1P18608 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgn1P18608 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Hmgn1P18608 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn1P18608 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hmgn1P18608 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn1P18608 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgn1P18608 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn1P18608 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hmgn1P18608 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgn1P18608 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn1P18608 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn1P18608 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.97■□□□□ 0.95
Hmgn1P18608 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn1P18608 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hmgn1P18608 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgn1P18608 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgn1P18608 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.96■□□□□ 0.95
Hmgn1P18608 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hmgn1P18608 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn1P18608 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn1P18608 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.95■□□□□ 0.94
Hmgn1P18608 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgn1P18608 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hmgn1P18608 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.95■□□□□ 0.94
Hmgn1P18608 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn1P18608 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgn1P18608 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn1P18608 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hmgn1P18608 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.93■□□□□ 0.94
Hmgn1P18608 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn1P18608 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn1P18608 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgn1P18608 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgn1P18608 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hmgn1P18608 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hmgn1P18608 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgn1P18608 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hmgn1P18608 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgn1P18608 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgn1P18608 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgn1P18608 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgn1P18608 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgn1P18608 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgn1P18608 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Hmgn1P18608 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn1P18608 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn1P18608 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgn1P18608 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgn1P18608 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgn1P18608 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn1P18608 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn1P18608 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn1P18608 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn1P18608 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Hmgn1P18608 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn1P18608 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgn1P18608 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.88■□□□□ 0.93
Hmgn1P18608 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn1P18608 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn1P18608 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgn1P18608 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgn1P18608 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.86■□□□□ 0.93
Hmgn1P18608 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgn1P18608 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.86■□□□□ 0.93
Hmgn1P18608 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgn1P18608 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn1P18608 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn1P18608 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn1P18608 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgn1P18608 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn1P18608 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Hmgn1P18608 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn1P18608 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn1P18608 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgn1P18608 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.84■□□□□ 0.93
Hmgn1P18608 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Hmgn1P18608 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn1P18608 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Hmgn1P18608 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgn1P18608 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.83■□□□□ 0.92
Hmgn1P18608 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn1P18608 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgn1P18608 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgn1P18608 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.82■□□□□ 0.92
Hmgn1P18608 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms