Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Capns1O88456 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Capns1O88456 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Capns1O88456 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Capns1O88456 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Capns1O88456 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Capns1O88456 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capns1O88456 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capns1O88456 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capns1O88456 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capns1O88456 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Capns1O88456 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Capns1O88456 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Capns1O88456 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Capns1O88456 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.05■□□□□ 0.96
Capns1O88456 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.05■□□□□ 0.96
Capns1O88456 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Capns1O88456 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Capns1O88456 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Capns1O88456 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Capns1O88456 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Capns1O88456 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Capns1O88456 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Capns1O88456 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Capns1O88456 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Capns1O88456 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Capns1O88456 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Capns1O88456 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Capns1O88456 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Capns1O88456 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Capns1O88456 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.03■□□□□ 0.96
Capns1O88456 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Capns1O88456 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Capns1O88456 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Capns1O88456 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Capns1O88456 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Capns1O88456 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Capns1O88456 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.01■□□□□ 0.95
Capns1O88456 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Capns1O88456 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Capns1O88456 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Capns1O88456 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.01■□□□□ 0.95
Capns1O88456 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Capns1O88456 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Capns1O88456 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Capns1O88456 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21■□□□□ 0.95
Capns1O88456 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Capns1O88456 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21■□□□□ 0.95
Capns1O88456 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Capns1O88456 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Capns1O88456 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Capns1O88456 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Capns1O88456 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Capns1O88456 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Capns1O88456 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.97■□□□□ 0.95
Capns1O88456 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Capns1O88456 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.97■□□□□ 0.95
Capns1O88456 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Capns1O88456 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Capns1O88456 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Capns1O88456 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Capns1O88456 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Capns1O88456 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Capns1O88456 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Capns1O88456 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.94■□□□□ 0.94
Capns1O88456 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.94■□□□□ 0.94
Capns1O88456 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Capns1O88456 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.94■□□□□ 0.94
Capns1O88456 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Capns1O88456 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Capns1O88456 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Capns1O88456 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Capns1O88456 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Capns1O88456 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Capns1O88456 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Capns1O88456 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.91■□□□□ 0.94
Capns1O88456 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Capns1O88456 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Capns1O88456 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Capns1O88456 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Capns1O88456 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.91■□□□□ 0.94
Capns1O88456 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.91■□□□□ 0.94
Capns1O88456 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Capns1O88456 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Capns1O88456 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Capns1O88456 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Capns1O88456 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Capns1O88456 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Capns1O88456 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.88■□□□□ 0.93
Capns1O88456 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.88■□□□□ 0.93
Capns1O88456 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.88■□□□□ 0.93
Capns1O88456 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.88■□□□□ 0.93
Capns1O88456 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capns1O88456 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capns1O88456 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capns1O88456 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capns1O88456 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.87■□□□□ 0.93
Capns1O88456 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Capns1O88456 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capns1O88456 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms