Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Efnb3O35393 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.08■□□□□ 0.48
Efnb3O35393 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Efnb3O35393 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Efnb3O35393 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Efnb3O35393 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Efnb3O35393 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Efnb3O35393 Gm24970-201ENSMUST00000175582 82 ntBASIC18.07■□□□□ 0.48
Efnb3O35393 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Efnb3O35393 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Efnb3O35393 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.07■□□□□ 0.48
Efnb3O35393 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Efnb3O35393 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Efnb3O35393 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Efnb3O35393 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.06■□□□□ 0.48
Efnb3O35393 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Efnb3O35393 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Efnb3O35393 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Efnb3O35393 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Efnb3O35393 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Efnb3O35393 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.05■□□□□ 0.48
Efnb3O35393 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Efnb3O35393 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Efnb3O35393 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.04■□□□□ 0.48
Efnb3O35393 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Efnb3O35393 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Efnb3O35393 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Efnb3O35393 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Efnb3O35393 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Efnb3O35393 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.03■□□□□ 0.48
Efnb3O35393 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Efnb3O35393 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Efnb3O35393 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.03■□□□□ 0.48
Efnb3O35393 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.03■□□□□ 0.48
Efnb3O35393 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Efnb3O35393 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Efnb3O35393 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Efnb3O35393 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.02■□□□□ 0.48
Efnb3O35393 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Efnb3O35393 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Efnb3O35393 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Efnb3O35393 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Efnb3O35393 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.01■□□□□ 0.47
Efnb3O35393 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18■□□□□ 0.47
Efnb3O35393 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18■□□□□ 0.47
Efnb3O35393 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Efnb3O35393 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18■□□□□ 0.47
Efnb3O35393 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Efnb3O35393 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Efnb3O35393 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Efnb3O35393 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Efnb3O35393 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.99■□□□□ 0.47
Efnb3O35393 Gm30023-201ENSMUST00000197970 889 ntBASIC17.99■□□□□ 0.47
Efnb3O35393 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Efnb3O35393 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Efnb3O35393 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Efnb3O35393 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Efnb3O35393 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Efnb3O35393 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Efnb3O35393 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Efnb3O35393 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Efnb3O35393 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.98■□□□□ 0.47
Efnb3O35393 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Efnb3O35393 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Efnb3O35393 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Efnb3O35393 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Efnb3O35393 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Efnb3O35393 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Efnb3O35393 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Efnb3O35393 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Efnb3O35393 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Efnb3O35393 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Efnb3O35393 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Efnb3O35393 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Efnb3O35393 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Efnb3O35393 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.95■□□□□ 0.46
Efnb3O35393 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Efnb3O35393 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Efnb3O35393 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Efnb3O35393 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Efnb3O35393 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Efnb3O35393 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.94■□□□□ 0.46
Efnb3O35393 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Efnb3O35393 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Efnb3O35393 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Efnb3O35393 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Efnb3O35393 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Efnb3O35393 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Efnb3O35393 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Efnb3O35393 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Efnb3O35393 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Efnb3O35393 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.93■□□□□ 0.46
Efnb3O35393 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Efnb3O35393 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Efnb3O35393 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Efnb3O35393 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Efnb3O35393 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Efnb3O35393 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Efnb3O35393 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Efnb3O35393 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms