Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.21■□□□□ 0.83
Gm11127A7VMS2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11127A7VMS2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11127A7VMS2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11127A7VMS2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11127A7VMS2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11127A7VMS2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm11127A7VMS2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm11127A7VMS2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11127A7VMS2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11127A7VMS2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.19■□□□□ 0.82
Gm11127A7VMS2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11127A7VMS2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11127A7VMS2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11127A7VMS2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11127A7VMS2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Gm11127A7VMS2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Gm11127A7VMS2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11127A7VMS2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm11127A7VMS2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm11127A7VMS2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Gm11127A7VMS2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11127A7VMS2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11127A7VMS2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11127A7VMS2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Gm11127A7VMS2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11127A7VMS2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11127A7VMS2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11127A7VMS2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm11127A7VMS2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11127A7VMS2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11127A7VMS2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm11127A7VMS2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11127A7VMS2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11127A7VMS2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Gm11127A7VMS2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11127A7VMS2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm11127A7VMS2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11127A7VMS2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11127A7VMS2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11127A7VMS2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11127A7VMS2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11127A7VMS2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11127A7VMS2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11127A7VMS2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.1■□□□□ 0.81
Gm11127A7VMS2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11127A7VMS2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11127A7VMS2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11127A7VMS2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11127A7VMS2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11127A7VMS2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11127A7VMS2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11127A7VMS2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11127A7VMS2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm11127A7VMS2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm11127A7VMS2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm11127A7VMS2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm11127A7VMS2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm11127A7VMS2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11127A7VMS2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gm11127A7VMS2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11127A7VMS2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11127A7VMS2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.07■□□□□ 0.8
Gm11127A7VMS2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11127A7VMS2 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm11127A7VMS2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11127A7VMS2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11127A7VMS2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11127A7VMS2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Gm11127A7VMS2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11127A7VMS2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Gm11127A7VMS2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gm11127A7VMS2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11127A7VMS2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11127A7VMS2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11127A7VMS2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11127A7VMS2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11127A7VMS2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11127A7VMS2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms