Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-1A0A0G2JEV5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-1A0A0G2JEV5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-1A0A0G2JEV5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-1A0A0G2JEV5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Trav7-1A0A0G2JEV5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-1A0A0G2JEV5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav7-1A0A0G2JEV5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-1A0A0G2JEV5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-1A0A0G2JEV5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-1A0A0G2JEV5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.61■□□□□ 0.41
Trav7-1A0A0G2JEV5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-1A0A0G2JEV5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-1A0A0G2JEV5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-1A0A0G2JEV5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-1A0A0G2JEV5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav7-1A0A0G2JEV5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav7-1A0A0G2JEV5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav7-1A0A0G2JEV5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav7-1A0A0G2JEV5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav7-1A0A0G2JEV5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.58■□□□□ 0.41
Trav7-1A0A0G2JEV5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7-1A0A0G2JEV5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-1A0A0G2JEV5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-1A0A0G2JEV5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-1A0A0G2JEV5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-1A0A0G2JEV5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav7-1A0A0G2JEV5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-1A0A0G2JEV5 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.56■□□□□ 0.4
Trav7-1A0A0G2JEV5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-1A0A0G2JEV5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-1A0A0G2JEV5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-1A0A0G2JEV5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-1A0A0G2JEV5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.55■□□□□ 0.4
Trav7-1A0A0G2JEV5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-1A0A0G2JEV5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-1A0A0G2JEV5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-1A0A0G2JEV5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-1A0A0G2JEV5 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.54■□□□□ 0.4
Trav7-1A0A0G2JEV5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-1A0A0G2JEV5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav7-1A0A0G2JEV5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-1A0A0G2JEV5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-1A0A0G2JEV5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav7-1A0A0G2JEV5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-1A0A0G2JEV5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav7-1A0A0G2JEV5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7-1A0A0G2JEV5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7-1A0A0G2JEV5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-1A0A0G2JEV5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-1A0A0G2JEV5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav7-1A0A0G2JEV5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-1A0A0G2JEV5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-1A0A0G2JEV5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-1A0A0G2JEV5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav7-1A0A0G2JEV5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-1A0A0G2JEV5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav7-1A0A0G2JEV5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-1A0A0G2JEV5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-1A0A0G2JEV5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trav7-1A0A0G2JEV5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trav7-1A0A0G2JEV5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-1A0A0G2JEV5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-1A0A0G2JEV5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-1A0A0G2JEV5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-1A0A0G2JEV5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-1A0A0G2JEV5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-1A0A0G2JEV5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Trav7-1A0A0G2JEV5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-1A0A0G2JEV5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-1A0A0G2JEV5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-1A0A0G2JEV5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-1A0A0G2JEV5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-1A0A0G2JEV5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-1A0A0G2JEV5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav7-1A0A0G2JEV5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-1A0A0G2JEV5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.46■□□□□ 0.39
Trav7-1A0A0G2JEV5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav7-1A0A0G2JEV5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms