Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BC053393A0A0B4J1F6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BC053393A0A0B4J1F6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BC053393A0A0B4J1F6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
BC053393A0A0B4J1F6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
BC053393A0A0B4J1F6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.29■□□□□ 0.52
BC053393A0A0B4J1F6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BC053393A0A0B4J1F6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BC053393A0A0B4J1F6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BC053393A0A0B4J1F6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BC053393A0A0B4J1F6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BC053393A0A0B4J1F6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BC053393A0A0B4J1F6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BC053393A0A0B4J1F6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
BC053393A0A0B4J1F6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BC053393A0A0B4J1F6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BC053393A0A0B4J1F6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
BC053393A0A0B4J1F6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
BC053393A0A0B4J1F6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
BC053393A0A0B4J1F6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BC053393A0A0B4J1F6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BC053393A0A0B4J1F6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BC053393A0A0B4J1F6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BC053393A0A0B4J1F6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC053393A0A0B4J1F6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BC053393A0A0B4J1F6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BC053393A0A0B4J1F6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC053393A0A0B4J1F6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC053393A0A0B4J1F6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC053393A0A0B4J1F6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BC053393A0A0B4J1F6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC053393A0A0B4J1F6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC053393A0A0B4J1F6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.24■□□□□ 0.51
BC053393A0A0B4J1F6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC053393A0A0B4J1F6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC053393A0A0B4J1F6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BC053393A0A0B4J1F6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BC053393A0A0B4J1F6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BC053393A0A0B4J1F6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BC053393A0A0B4J1F6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
BC053393A0A0B4J1F6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.23■□□□□ 0.51
BC053393A0A0B4J1F6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BC053393A0A0B4J1F6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
BC053393A0A0B4J1F6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BC053393A0A0B4J1F6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC053393A0A0B4J1F6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
BC053393A0A0B4J1F6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BC053393A0A0B4J1F6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BC053393A0A0B4J1F6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BC053393A0A0B4J1F6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BC053393A0A0B4J1F6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC053393A0A0B4J1F6 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.19■□□□□ 0.5
BC053393A0A0B4J1F6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BC053393A0A0B4J1F6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC053393A0A0B4J1F6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BC053393A0A0B4J1F6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BC053393A0A0B4J1F6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.18■□□□□ 0.5
BC053393A0A0B4J1F6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BC053393A0A0B4J1F6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC053393A0A0B4J1F6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC053393A0A0B4J1F6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BC053393A0A0B4J1F6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BC053393A0A0B4J1F6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BC053393A0A0B4J1F6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BC053393A0A0B4J1F6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
BC053393A0A0B4J1F6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BC053393A0A0B4J1F6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BC053393A0A0B4J1F6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BC053393A0A0B4J1F6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BC053393A0A0B4J1F6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BC053393A0A0B4J1F6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BC053393A0A0B4J1F6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BC053393A0A0B4J1F6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BC053393A0A0B4J1F6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.13■□□□□ 0.49
BC053393A0A0B4J1F6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
BC053393A0A0B4J1F6 Particl-201ENSMUST00000205370 1560 ntBASIC18.13■□□□□ 0.49
BC053393A0A0B4J1F6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BC053393A0A0B4J1F6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BC053393A0A0B4J1F6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BC053393A0A0B4J1F6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BC053393A0A0B4J1F6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BC053393A0A0B4J1F6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BC053393A0A0B4J1F6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BC053393A0A0B4J1F6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms